Miyakogusa Predicted Gene
- Lj5g3v0110910.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0110910.1 Non Chatacterized Hit- tr|K4CN25|K4CN25_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,42.99,2e-19,Acid proteases,Peptidase aspartic; no
description,Peptidase aspartic, catalytic; BASIC 7S
GLOBULIN-R,gene.g58410.t1.1
(331 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC69329 weakly similar to UniRef100_Q3KU27 Cluster: Nec... 367 e-101
gnl|LJGI|BP077472 weakly similar to UniRef100_Q05929 Cluster: ED... 54 6e-07
gnl|LJGI|TC74495 weakly similar to UniRef100_A7PSD5 Cluster: Chr... 54 6e-07
>gnl|LJGI|TC69329 weakly similar to UniRef100_Q3KU27 Cluster: Nectarin IV; n=1;
Nicotiana langsdorffii x Nicotiana sanderae|Rep: Nectarin
IV - Nicotiana langsdorffii x Nicotiana sanderae
(Ornamental tobacco), partial (34%)
Length = 1479
Score = 367 bits (185), Expect = e-101
Identities = 284/317 (89%)
Strand = Plus / Plus
Query: 3 gaaagcggcagcagtggcaccgttcggagcatgtttcgatctcagcaccattgacaggac 62
||||| || |||||| ||||||||||||||||||||||||||||||||||| | || |||
Sbjct: 1006 gaaagtggaagcagtcgcaccgttcggagcatgtttcgatctcagcaccatcggcaagac 1065
Query: 63 ggctactggactggatgtgcccactattgatctggtgctgcaggggaatgttgagtggac 122
||| |||||||| |||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1066 cattacaggactggacgtgcccactattgatctggtgctgcagggggatgttgagtggac 1125
Query: 123 aatttatggtggcaattcaatggtgttggtaaagaaaaatgtagcatgcctcggattcgt 182
||||||||| || |||||||||||||||||||| |||| ||||||||||||||||| ||
Sbjct: 1126 aatttatggcggaaattcaatggtgttggtaaatgaaaaagtagcatgcctcggatttgt 1185
Query: 183 ggatggtgggaaagaggcaatggcagcagttgttattggtgggcaccagttggaggacaa 242
|||||||||||| ||||| | | |||||||||||||||||||||||||||||||||||
Sbjct: 1186 ggatggtgggaagacggcaaggactgcagttgttattggtgggcaccagttggaggacaa 1245
Query: 243 ccttctggagtttgatttggcttcctccaaacttggcttcacctcttccctcctccttca 302
|||| |||| |||||||| | |||||||||||| ||||||| ||||||||||||||||||
Sbjct: 1246 ccttgtggaatttgatttaggttcctccaaactgggcttcagctcttccctcctccttca 1305
Query: 303 ccatgcaagatgttccc 319
|||||| ||||||||
Sbjct: 1306 aaatgcaacatgttccc 1322
>gnl|LJGI|BP077472 weakly similar to UniRef100_Q05929 Cluster: EDGP precursor; n=1;
Daucus carota|Rep: EDGP precursor - Daucus carota
(Carrot), partial (8%)
Length = 406
Score = 54.0 bits (27), Expect = 6e-07
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 212 ttgttattggtgggcaccagttggaggacaaccttctggagtttgatttgg 262
||||| |||||||||| ||||||||||| || || |||||||||||||||
Sbjct: 307 ttgttcttggtgggcatcagttggaggataattttttggagtttgatttgg 257
>gnl|LJGI|TC74495 weakly similar to UniRef100_A7PSD5 Cluster: Chromosome chr14
scaffold_27, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_27, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (20%)
Length = 874
Score = 54.0 bits (27), Expect = 6e-07
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 212 ttgttattggtgggcaccagttggaggacaaccttctggagtttgatttgg 262
||||| |||||||||| ||||||||||| || || |||||||||||||||
Sbjct: 677 ttgttcttggtgggcatcagttggaggataattttttggagtttgatttgg 727