Miyakogusa Predicted Gene
- Lj5g3v0109850.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0109850.1 Non Chatacterized Hit- tr|B8A1Y4|B8A1Y4_MAIZE
Uncharacterized protein OS=Zea mays PE=2 SV=1,59.09,3e-18,Hypothetical
protein TM0160,Bifunctional nuclease; DNase-RNase,Bifunctional
nuclease,CUFF.52836.1
(984 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60194 similar to UniRef100_Q9FWS6 Cluster: F1B16.9 pr... 1951 0.0
gnl|LJGI|TC63855 similar to UniRef100_Q9FWS6 Cluster: F1B16.9 pr... 710 0.0
gnl|LJGI|TC73567 weakly similar to UniRef100_Q9FWS6 Cluster: F1B... 450 e-126
gnl|LJGI|FS341955 similar to UniRef100_A7NT78 Cluster: Chromosom... 281 4e-75
gnl|LJGI|BP038326 92 8e-18
>gnl|LJGI|TC60194 similar to UniRef100_Q9FWS6 Cluster: F1B16.9 protein; n=1;
Arabidopsis thaliana|Rep: F1B16.9 protein - Arabidopsis
thaliana (Mouse-ear cress), partial (74%)
Length = 1453
Score = 1951 bits (984), Expect = 0.0
Identities = 984/984 (100%)
Strand = Plus / Plus
Query: 1 atgggttctgtgcaaggaccagctgtgtgtccatctaaacttgctgggttctgcagtctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 atgggttctgtgcaaggaccagctgtgtgtccatctaaacttgctgggttctgcagtctt 266
Query: 61 ccaatgatggggccaatgaatgtgagatgtattagaagtgaatttttgggactcaatggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 ccaatgatggggccaatgaatgtgagatgtattagaagtgaatttttgggactcaatggc 326
Query: 121 ggcggttccaaggctaagcagcggggtttcctttcttgcgatgtaaacacacgaaagtgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 ggcggttccaaggctaagcagcggggtttcctttcttgcgatgtaaacacacgaaagtgc 386
Query: 181 tggacggtagttcgttgtagtttcaatccatcatcctcaaatgacagtgagaatttcatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 tggacggtagttcgttgtagtttcaatccatcatcctcaaatgacagtgagaatttcatt 446
Query: 241 gaaaaagatgaagagtatgttaactctagtgtgattgaagctgttgaggtgaagagtgga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 gaaaaagatgaagagtatgttaactctagtgtgattgaagctgttgaggtgaagagtgga 506
Query: 301 gcagatggtttcataatcaaaatgagggatggaagacacttgagatgcgttcacaacaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 gcagatggtttcataatcaaaatgagggatggaagacacttgagatgcgttcacaacaat 566
Query: 361 cctcagggaggacatcttccagattatgcaccacatcctgctattgtattgaagatggaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 cctcagggaggacatcttccagattatgcaccacatcctgctattgtattgaagatggaa 626
Query: 421 gatgggactggtctacttcttcctataattgttttggagatgccaagcgtcttgctaatg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 gatgggactggtctacttcttcctataattgttttggagatgccaagcgtcttgctaatg 686
Query: 481 gcagcaatacgcgatgttcctatagccagacctactttgtatcaagtagtgaaggaaatg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 gcagcaatacgcgatgttcctatagccagacctactttgtatcaagtagtgaaggaaatg 746
Query: 541 attgacaagatgggttatgaagtgagacttgtcagagtgactaggagagtccatgaggca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 attgacaagatgggttatgaagtgagacttgtcagagtgactaggagagtccatgaggca 806
Query: 601 tattttgcccagttgtatcttaccaaggttgggaatgaggcagaatgtcggactttcgac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 807 tattttgcccagttgtatcttaccaaggttgggaatgaggcagaatgtcggactttcgac 866
Query: 661 cttcgaccttcagatgctatcaatattgcagtaagatgcaaggtgccaatacaagtcaac 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 867 cttcgaccttcagatgctatcaatattgcagtaagatgcaaggtgccaatacaagtcaac 926
Query: 721 aagtacttggcatacagtgatggaatgagagtaattgaatcaggcaaactgtcaacacag 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 927 aagtacttggcatacagtgatggaatgagagtaattgaatcaggcaaactgtcaacacag 986
Query: 781 ttccctggtttcgatggccgattatttactgaaatggaccggccaaatggtcagccatgt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 987 ttccctggtttcgatggccgattatttactgaaatggaccggccaaatggtcagccatgt 1046
Query: 841 gttgaaactgaggaattcaatcttttgcacaacatgttgaaagctgttggtgaagaacgc 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1047 gttgaaactgaggaattcaatcttttgcacaacatgttgaaagctgttggtgaagaacgc 1106
Query: 901 tataaagatgctgctttgtggagggacagacttaatcaacttagggctggaaaaaatgtg 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1107 tataaagatgctgctttgtggagggacagacttaatcaacttagggctggaaaaaatgtg 1166
Query: 961 aataacagatcctggacactttag 984
||||||||||||||||||||||||
Sbjct: 1167 aataacagatcctggacactttag 1190
>gnl|LJGI|TC63855 similar to UniRef100_Q9FWS6 Cluster: F1B16.9 protein; n=1;
Arabidopsis thaliana|Rep: F1B16.9 protein - Arabidopsis
thaliana (Mouse-ear cress), partial (78%)
Length = 1496
Score = 710 bits (358), Expect = 0.0
Identities = 640/734 (87%)
Strand = Plus / Plus
Query: 247 gatgaagagtatgttaactctagtgtgattgaagctgttgaggtgaagagtggagcagat 306
|||||||| ||||||||||| ||| | ||||||||||||||||||||||||||||||||
Sbjct: 431 gatgaagattatgttaactccagtattgttgaagctgttgaggtgaagagtggagcagat 490
Query: 307 ggtttcataatcaaaatgagggatggaagacacttgagatgcgttcacaacaatcctcag 366
||||| | ||||| ||||||||||| ||||| |||||||| | |||||||| |||||
Sbjct: 491 ggttttctgatcaagatgagggatggtagacatgtgagatgcatccacaacaaccctcaa 550
Query: 367 ggaggacatcttccagattatgcaccacatcctgctattgtattgaagatggaagatggg 426
||||| | ||||| ||||||||||| |||||||||||||| ||||||||||| ||||||
Sbjct: 551 ggagggctgcttcctgattatgcaccccatcctgctattgtgttgaagatggaggatggg 610
Query: 427 actggtctacttcttcctataattgttttggagatgccaagcgtcttgctaatggcagca 486
|||||||||||||| || || |||||||||||||||||||| ||||| |||||||||||
Sbjct: 611 actggtctacttctacccatcattgttttggagatgccaagtgtcttattaatggcagca 670
Query: 487 atacgcgatgttcctatagccagacctactttgtatcaagtagtgaaggaaatgattgac 546
||||| |||||| ||||| ||||||||||| ||||||||||||||||| |||||||||
Sbjct: 671 gtacgcaatgttcaaatagcaagacctactttatatcaagtagtgaaggagatgattgac 730
Query: 547 aagatgggttatgaagtgagacttgtcagagtgactaggagagtccatgaggcatatttt 606
||||||||||| |||| ||| ||| ||||| |||| |||||| |||||||||||||||
Sbjct: 731 aagatgggttaccaagtcagagctgttagagttactaagagagttcatgaggcatatttt 790
Query: 607 gcccagttgtatcttaccaaggttgggaatgaggcagaatgtcggactttcgaccttcga 666
|| ||| | |||||| | |||||||| ||||||| ||||||| || || |||||||||
Sbjct: 791 gctcagatatatctttctaaggttggaaatgaggaagaatgtgtgagctttgaccttcga 850
Query: 667 ccttcagatgctatcaatattgcagtaagatgcaaggtgccaatacaagtcaacaagtac 726
||||||||||||||||| ||||| || ||||||||||||||||||||||||||||||||
Sbjct: 851 ccttcagatgctatcaacattgctgttagatgcaaggtgccaatacaagtcaacaagtat 910
Query: 727 ttggcatacagtgatggaatgagagtaattgaatcaggcaaactgtcaacacagttccct 786
|||||||||||||||||||||||||||||||| ||||||||||| |||||||||| |||
Sbjct: 911 ttggcatacagtgatggaatgagagtaattgagtcaggcaaactttcaacacagtctcct 970
Query: 787 ggtttcgatggccgattatttactgaaatggaccggccaaatggtcagccatgtgttgaa 846
|||| || |||| |||||| |||||| ||||||| |||| | |||| ||| ||||
Sbjct: 971 ggttcagacggcccattattcactgaactggaccgaccaagccataagccttgtactgaa 1030
Query: 847 actgaggaattcaatcttttgcacaacatgttgaaagctgttggtgaagaacgctataaa 906
|| |||| |||||||||||| | |||||| ||||||||||||| |||||||||||| ||
Sbjct: 1031 accaaggagttcaatcttttggagaacatgatgaaagctgttggagaagaacgctatcaa 1090
Query: 907 gatgctgctttgtggagggacagacttaatcaacttagggctggaaaaaatgtgaataac 966
||||||||| | |||||||||| |||||||||||||||||||||||| || | |||||||
Sbjct: 1091 gatgctgctctttggagggacaaacttaatcaacttagggctggaaagaaggcgaataac 1150
Query: 967 agatcctggacact 980
||||||||||||||
Sbjct: 1151 agatcctggacact 1164
>gnl|LJGI|TC73567 weakly similar to UniRef100_Q9FWS6 Cluster: F1B16.9 protein; n=1;
Arabidopsis thaliana|Rep: F1B16.9 protein - Arabidopsis
thaliana (Mouse-ear cress), partial (19%)
Length = 543
Score = 450 bits (227), Expect = e-126
Identities = 227/227 (100%)
Strand = Plus / Plus
Query: 758 aatcaggcaaactgtcaacacagttccctggtttcgatggccgattatttactgaaatgg 817
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aatcaggcaaactgtcaacacagttccctggtttcgatggccgattatttactgaaatgg 60
Query: 818 accggccaaatggtcagccatgtgttgaaactgaggaattcaatcttttgcacaacatgt 877
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 accggccaaatggtcagccatgtgttgaaactgaggaattcaatcttttgcacaacatgt 120
Query: 878 tgaaagctgttggtgaagaacgctataaagatgctgctttgtggagggacagacttaatc 937
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgaaagctgttggtgaagaacgctataaagatgctgctttgtggagggacagacttaatc 180
Query: 938 aacttagggctggaaaaaatgtgaataacagatcctggacactttag 984
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aacttagggctggaaaaaatgtgaataacagatcctggacactttag 227
>gnl|LJGI|FS341955 similar to UniRef100_A7NT78 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (39%)
Length = 778
Score = 281 bits (142), Expect = 4e-75
Identities = 247/282 (87%)
Strand = Plus / Plus
Query: 247 gatgaagagtatgttaactctagtgtgattgaagctgttgaggtgaagagtggagcagat 306
|||||||| ||||||||||| ||| | ||||||||||||||||||||||||||||||||
Sbjct: 497 gatgaagattatgttaactccagtattgttgaagctgttgaggtgaagagtggagcagat 556
Query: 307 ggtttcataatcaaaatgagggatggaagacacttgagatgcgttcacaacaatcctcag 366
||||| | ||||| ||||||||||| ||||| |||||||| | |||||||| |||||
Sbjct: 557 ggttttctgatcaagatgagggatggtagacatgtgagatgcatccacaacaaccctcaa 616
Query: 367 ggaggacatcttccagattatgcaccacatcctgctattgtattgaagatggaagatggg 426
||||| | ||||| ||||||||||| |||||||||||||| ||||||||||| ||||||
Sbjct: 617 ggagggctgcttcctgattatgcaccccatcctgctattgtgttgaagatggaggatggg 676
Query: 427 actggtctacttcttcctataattgttttggagatgccaagcgtcttgctaatggcagca 486
|||||||||||||| || || |||||||||||||||||||| ||||| |||||||||||
Sbjct: 677 actggtctacttctacccatcattgttttggagatgccaagtgtcttattaatggcagca 736
Query: 487 atacgcgatgttcctatagccagacctactttgtatcaagta 528
||||| |||||| ||||| ||||||||||| |||||||||
Sbjct: 737 gtacgcaatgttcaaatagcaagacctactttatatcaagta 778
>gnl|LJGI|BP038326
Length = 553
Score = 91.7 bits (46), Expect = 8e-18
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 919 tggagggacagacttaatcaacttagggctggaaaaaatgtgaataacagatcctggaca 978
|||||||||| |||||||||||||||||||||||| || | |||||||||||||||||||
Sbjct: 358 tggagggacaaacttaatcaacttagggctggaaagaaggcgaataacagatcctggaca 299
Query: 979 ct 980
||
Sbjct: 298 ct 297