Miyakogusa Predicted Gene

Lj5g3v0108610.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v0108610.1 tr|I1HPQ6|I1HPQ6_BRADI 50S ribosomal protein L31
OS=Brachypodium distachyon GN=BRADI2G44440 PE=3 SV=,57.14,3e-19,L31:
ribosomal protein L31,Ribosomal protein L31; Ribosomal_L31,Ribosomal
protein L31; RIBOSOMALL31,,CUFF.52568.1
         (468 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC67609 similar to UniRef100_Q9ZT04 Cluster: 50S riboso...   856   0.0  

>gnl|LJGI|TC67609 similar to UniRef100_Q9ZT04 Cluster: 50S ribosomal protein L31;
           n=1; Medicago sativa|Rep: 50S ribosomal protein L31 -
           Medicago sativa (Alfalfa), partial (76%)
          Length = 592

 Score =  856 bits (432), Expect = 0.0
 Identities = 432/432 (100%)
 Strand = Plus / Plus

                                                                       
Query: 37  aaatcaacaaacactcaatcaatggcgcagtgcgttaccaacactttcgttcaaggagga 96
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3   aaatcaacaaacactcaatcaatggcgcagtgcgttaccaacactttcgttcaaggagga 62

                                                                       
Query: 97  aagcctctccttccacttcccacaaaaaccaccgttggaagaagagctgagaatgttact 156
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63  aagcctctccttccacttcccacaaaaaccaccgttggaagaagagctgagaatgttact 122

                                                                       
Query: 157 gtgggtgtgtggtgcaggaagaaggacatacacccgaaattctacgacgacgcgaaagtg 216
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 gtgggtgtgtggtgcaggaagaaggacatacacccgaaattctacgacgacgcgaaagtg 182

                                                                       
Query: 217 agctgcagcggcgagcttgtgatgacaaccggtggcacccagaaggagtacgtggtggat 276
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 agctgcagcggcgagcttgtgatgacaaccggtggcacccagaaggagtacgtggtggat 242

                                                                       
Query: 277 gtgtggtcagggaaccaccctttcttcctcggaaaccgctcagcttccatgatcagcgac 336
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 gtgtggtcagggaaccaccctttcttcctcggaaaccgctcagcttccatgatcagcgac 302

                                                                       
Query: 337 gaccaggttgagaagttcaagaagaagtacggtgagcttacggatatcatggagattccg 396
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 gaccaggttgagaagttcaagaagaagtacggtgagcttacggatatcatggagattccg 362

                                                                       
Query: 397 aatctcaaaggagagattgttataccttccaggcgcaagggaatttccaaagcaggcaag 456
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 aatctcaaaggagagattgttataccttccaggcgcaagggaatttccaaagcaggcaag 422

                       
Query: 457 aaaaagtagagc 468
           ||||||||||||
Sbjct: 423 aaaaagtagagc 434