Miyakogusa Predicted Gene
- Lj5g3v0108330.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0108330.1 tr|B1YJM5|B1YJM5_EXIS2 Ornithine
carbamoyltransferase, catabolic OS=Exiguobacterium sibiricum
(strai,54.55,2e-19,AOTCASE,Aspartate/ornithine carbamoyltransferase;
seg,NULL; Aspartate/ornithine carbamoyltransferase,CUFF.52553.1
(237 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC68325 similar to UniRef100_Q9SEX5 Cluster: Ornithine ... 470 e-132
gnl|LJGI|TC59662 homologue to UniRef100_Q43814 Cluster: Ornithin... 174 2e-43
gnl|LJGI|AV772654 UniRef100_A6WEU6 Cluster: Auxin Efflux Carrier... 66 1e-10
>gnl|LJGI|TC68325 similar to UniRef100_Q9SEX5 Cluster: Ornithine carbamoyltransferase;
n=1; Canavalia lineata|Rep: Ornithine
carbamoyltransferase - Canavalia lineata, partial (89%)
Length = 1459
Score = 470 bits (237), Expect = e-132
Identities = 237/237 (100%)
Strand = Plus / Plus
Query: 1 atggggcaaaaggaagaggctgagaagcgccgtgaagccttcaaaggatttcaggtggac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 929 atggggcaaaaggaagaggctgagaagcgccgtgaagccttcaaaggatttcaggtggac 988
Query: 61 caaagtcttatggatatagctgggtcaaaagcacttttcatgcattgtttaccagcagaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 989 caaagtcttatggatatagctgggtcaaaagcacttttcatgcattgtttaccagcagaa 1048
Query: 121 aaaggagtggaggtgactgaggaagttattgaaggtccaaagtcaatcatcttcccgcaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1049 aaaggagtggaggtgactgaggaagttattgaaggtccaaagtcaatcatcttcccgcaa 1108
Query: 181 gctgagaatcgattacatgcacagaatggcataatgctccatgtccttggcaagtaa 237
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1109 gctgagaatcgattacatgcacagaatggcataatgctccatgtccttggcaagtaa 1165
>gnl|LJGI|TC59662 homologue to UniRef100_Q43814 Cluster: Ornithine
carbamoyltransferase, chloroplast precursor; n=1; Pisum
sativum|Rep: Ornithine carbamoyltransferase, chloroplast
precursor - Pisum sativum (Garden pea), partial (85%)
Length = 1367
Score = 174 bits (88), Expect = 2e-43
Identities = 199/236 (84%)
Strand = Plus / Plus
Query: 1 atggggcaaaaggaagaggctgagaagcgccgtgaagccttcaaaggatttcaggtggac 60
||||| ||||||||||| |||| | || ||||||| |||||||||||||||||||||
Sbjct: 979 atgggccaaaaggaagaagctgcataccgtcgtgaagtgttcaaaggatttcaggtggac 1038
Query: 61 caaagtcttatggatatagctgggtcaaaagcacttttcatgcattgtttaccagcagaa 120
||| |||||||||||| ||||| ||||| || ||||||||||||| |||||||| |||
Sbjct: 1039 aaaattcttatggatattgctggttcaaaggcgtttttcatgcattgcttaccagcggaa 1098
Query: 121 aaaggagtggaggtgactgaggaagttattgaaggtccaaagtcaatcatcttcccgcaa 180
| ||| |||||||| ||||| |||||| |||||| ||| | ||||| |||| ||||||
Sbjct: 1099 agaggggtggaggtaactgacgaagttgttgaagctccgtattcaatagtctttccgcaa 1158
Query: 181 gctgagaatcgattacatgcacagaatggcataatgctccatgtccttggcaagta 236
|||||||| ||| | || ||||| |||| ||||||||||||||| |||||||||||
Sbjct: 1159 gctgagaaccgaatgcacgcacaaaatgccataatgctccatgtacttggcaagta 1214
>gnl|LJGI|AV772654 UniRef100_A6WEU6 Cluster: Auxin Efflux Carrier; n=1; Kineococcus
radiotolerans SRS30216|Rep: Auxin Efflux Carrier -,
partial (3%)
Length = 400
Score = 65.9 bits (33), Expect = 1e-10
Identities = 80/93 (86%), Gaps = 2/93 (2%)
Strand = Plus / Minus
Query: 136 actgaggaagttattgaaggtccaaagtcaatcatcttcccgca-agctgagaatcgatt 194
||||||||| |||||| | |||| ||||| ||||| || |||| |||||||||||||||
Sbjct: 400 actgaggaaattattgtaagtcccaagtccatcatttttccgcccagctgagaatcgatt 341
Query: 195 acatgcacagaatggcata-atgctccatgtcc 226
||| |||| | |||||||| |||||||||||||
Sbjct: 340 acaagcaccggatggcatatatgctccatgtcc 308