Miyakogusa Predicted Gene
- Lj5g3v0108320.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0108320.1 Non Chatacterized Hit- tr|J3NE08|J3NE08_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB12G2,56.47,2e-17,SUBFAMILY NOT NAMED,NULL; AUXILIN/CYCLIN
G-ASSOCIATED KINASE-RELATED,NULL; seg,NULL;
coiled-coil,NUL,CUFF.52567.1
(3846 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC75105 735 0.0
gnl|LJGI|DC595795 similar to UniRef100_A7NTA1 Cluster: Chromosom... 581 e-164
gnl|LJGI|DN652338 256 9e-67
gnl|LJGI|BP073417 similar to UniRef100_A7PUS2 Cluster: Chromosom... 167 6e-40
>gnl|LJGI|TC75105
Length = 435
Score = 735 bits (371), Expect = 0.0
Identities = 371/371 (100%)
Strand = Plus / Plus
Query: 1 atggagtccggagccgccaccgcgactctctccaagaagctttcgaacggctatggcgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29 atggagtccggagccgccaccgcgactctctccaagaagctttcgaacggctatggcgtg 88
Query: 61 tccggaagatccgcgtacgaaggcgttttcgctgctccgattaagcacagagcaccgagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89 tccggaagatccgcgtacgaaggcgttttcgctgctccgattaagcacagagcaccgagc 148
Query: 121 ttcgcttctccgctcggtgattaccgggagattttcggagccggctccggagcttgttca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 ttcgcttctccgctcggtgattaccgggagattttcggagccggctccggagcttgttca 208
Query: 181 tcgattccgattctcgagcttccggacctcaacgagatgagagcggcgatggatgacgtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 tcgattccgattctcgagcttccggacctcaacgagatgagagcggcgatggatgacgtt 268
Query: 241 agccgctcgaagctcgattactcgaaggtcttcggtgggttcggggatgtagacggtgct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 agccgctcgaagctcgattactcgaaggtcttcggtgggttcggggatgtagacggtgct 328
Query: 301 gtgcctctcgaggacctggttgctcagactaaagtggcagaagatagcttcaccagcaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 gtgcctctcgaggacctggttgctcagactaaagtggcagaagatagcttcaccagcaga 388
Query: 361 gcaccggcacg 371
|||||||||||
Sbjct: 389 gcaccggcacg 399
>gnl|LJGI|DC595795 similar to UniRef100_A7NTA1 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (3%)
Length = 414
Score = 581 bits (293), Expect = e-164
Identities = 305/309 (98%)
Strand = Plus / Plus
Query: 2841 gggaaaagcagagaatgactgcaatccggcagtgcctgttgaagaaacaacttctgagtc 2900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gggaaaagcagagaatgactgcaatccggcagtgcctgttgaagaaacaacttctgagtc 60
Query: 2901 tgtagaaacatgtacggatgccatggagactagatttgcatcagatgaagagatagatga 2960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgtagaaacatgtacggatgccatggagactagatttgcatcagatgaagagatagatga 120
Query: 2961 gaaacgatcttactcctcttctgaggaaattttgtttgacaaaaaagacaagatagactc 3020
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gaaacgatcttactccggggctgaggaaattttgtttgacaaaaaagacaagatagactc 180
Query: 3021 atctcagacacctgctatatctgaattgcagtcaagcccctacaaaaaagaggaggttaa 3080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atctcagacacctgctatatctgaattgcagtcaagcccctacaaaaaagaggaggttaa 240
Query: 3081 atccatgacaatggaagagaaggaagccattggtaaatcgcagaaggcagagctggaaaa 3140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atccatgacaatggaagagaaggaagccattggtaaatcgcagaaggcagagctggaaaa 300
Query: 3141 gggacgccg 3149
|||||||||
Sbjct: 301 gggacgccg 309
Score = 73.8 bits (37), Expect = 7e-12
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 3218 caatccgtgaagctcgtgaaagggcatttgctgatgc 3254
|||||||||||||||||||||||||||||||||||||
Sbjct: 378 caatccgtgaagctcgtgaaagggcatttgctgatgc 414
Score = 65.9 bits (33), Expect = 2e-09
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 2694 aaaagcagagaatgaccgcaatccgccagtgcttgttgacgaaacaact 2742
|||||||||||||||| |||||||| |||||| |||||| |||||||||
Sbjct: 4 aaaagcagagaatgactgcaatccggcagtgcctgttgaagaaacaact 52
Score = 60.0 bits (30), Expect = 1e-07
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 2551 aatgactgcaatctgtcaatgcttgttgaagaaacaactcctgaatctgtagaa 2604
||||||||||||| | || ||| |||||||||||||||| |||| |||||||||
Sbjct: 14 aatgactgcaatccggcagtgcctgttgaagaaacaacttctgagtctgtagaa 67
>gnl|LJGI|DN652338
Length = 129
Score = 256 bits (129), Expect = 9e-67
Identities = 129/129 (100%)
Strand = Plus / Plus
Query: 445 tcacagtcatccaatgatgccaaaaggatcaatatgtcatatcatcaagttagccaagga 504
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcacagtcatccaatgatgccaaaaggatcaatatgtcatatcatcaagttagccaagga 60
Query: 505 agtcaaaatggaacaagtgcgaaaacacatatagctcaagtccatgctgtccctgcttac 564
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agtcaaaatggaacaagtgcgaaaacacatatagctcaagtccatgctgtccctgcttac 120
Query: 565 acctgttta 573
|||||||||
Sbjct: 121 acctgttta 129
>gnl|LJGI|BP073417 similar to UniRef100_A7PUS2 Cluster: Chromosome chr4 scaffold_32,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_32, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (32%)
Length = 470
Score = 167 bits (84), Expect = 6e-40
Identities = 84/84 (100%)
Strand = Plus / Minus
Query: 3760 gccgaagttctagatgctgatgttaaaaggtggtcagctgggaagacagggaacttgagg 3819
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 gccgaagttctagatgctgatgttaaaaggtggtcagctgggaagacagggaacttgagg 411
Query: 3820 gcattgctttcaacattacaatat 3843
||||||||||||||||||||||||
Sbjct: 410 gcattgctttcaacattacaatat 387