Miyakogusa Predicted Gene
- Lj5g3v0107110.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0107110.1 Non Chatacterized Hit- tr|K3XVK5|K3XVK5_SETIT
Uncharacterized protein OS=Setaria italica GN=Si005963,32.99,3e-18,
,CUFF.52544.1
(705 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC74706 weakly similar to UniRef100_A7NTB4 Cluster: Chr... 1390 0.0
gnl|LJGI|TC63354 weakly similar to UniRef100_A7NTB4 Cluster: Chr... 688 0.0
>gnl|LJGI|TC74706 weakly similar to UniRef100_A7NTB4 Cluster: Chromosome chr18
scaffold_1, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr18 scaffold_1, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (16%)
Length = 1130
Score = 1390 bits (701), Expect = 0.0
Identities = 704/705 (99%)
Strand = Plus / Plus
Query: 1 atgatgatgaccaaaaacggtgctacaactttgcagattacaattccaagctattgtgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atgatgatgaccaaaaacggtgctacaactttgcagattacaattccaagctattgtgaa 300
Query: 61 gttaaggtataccgatcattatgcatagagcttcatggattcattggtagaattttgcac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gttaaggtataccgatcattatgcatagagcttcatggattcattggtagaattttgcac 360
Query: 121 ttattattggatatcgaatctgccagaccaaattgtgctttagcaatgcaggcattgtgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ttattattggatatcgaatctgccagaccaaattgtgctttagcaatgcaggcattgtgc 420
Query: 181 tcattgcacttcactttggataaagccaagtcagtcatcaaacattgttctgagtcaagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tcattgcacttcactttggataaagccaagtcagtcatcaaacattgttctgagtcaagt 480
Query: 241 caactctacctggtaatcacatcaaacaagatactttcaagatgtgaaaaaataagaagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 caactctacctggtaatcacatcaaacaagatactttcaagatgtgaaaaaataagaagt 540
Query: 301 gcttttgagttgtacttggctcagattcaaaatgcagttccaataccattggctgctgag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gcttttgagttgtacttggctcagattcaaaatgcagttccaataccattggctgctgag 600
Query: 361 atatctgcaatacttcgtgatctgagggacacagaattttccctggaatttgcagaagaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 atatctgcaatacttcgtgatctgagggacacagaattttccctggaatttgcagaagaa 660
Query: 421 gaggctaggaaagtagtgttgtccatgtttgagaagaattttcctgattcagtgtctatg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gaggctaggaaagtagtgttgtccatgtttgagaagaattttcctgattcagtgtctatg 720
Query: 481 gagaatgcagaacttgaagctattcaaattgcaactttgaggttgaatatcaaatcttca 540
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 721 gagaatgcagaacttgaagctattcaaattgcaactttgaagttgaatatcaaatcttca 780
Query: 541 tcccatctcttagtagagaaagcaactcttaagaggcaacttaaaaatgtcaatggcaca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tcccatctcttagtagagaaagcaactcttaagaggcaacttaaaaatgtcaatggcaca 840
Query: 601 aaccaaaaggagaaggaacttctagaataccttttgtatttgttgatcaaatatgagaaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 aaccaaaaggagaaggaacttctagaataccttttgtatttgttgatcaaatatgagaaa 900
Query: 661 ctcatttgccaggttcaaaatggaagccaaaccagtccttgaaac 705
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 ctcatttgccaggttcaaaatggaagccaaaccagtccttgaaac 945
>gnl|LJGI|TC63354 weakly similar to UniRef100_A7NTB4 Cluster: Chromosome chr18
scaffold_1, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr18 scaffold_1, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (9%)
Length = 947
Score = 688 bits (347), Expect = 0.0
Identities = 347/347 (100%)
Strand = Plus / Plus
Query: 359 agatatctgcaatacttcgtgatctgagggacacagaattttccctggaatttgcagaag 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 agatatctgcaatacttcgtgatctgagggacacagaattttccctggaatttgcagaag 508
Query: 419 aagaggctaggaaagtagtgttgtccatgtttgagaagaattttcctgattcagtgtcta 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 aagaggctaggaaagtagtgttgtccatgtttgagaagaattttcctgattcagtgtcta 568
Query: 479 tggagaatgcagaacttgaagctattcaaattgcaactttgaggttgaatatcaaatctt 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 tggagaatgcagaacttgaagctattcaaattgcaactttgaggttgaatatcaaatctt 628
Query: 539 catcccatctcttagtagagaaagcaactcttaagaggcaacttaaaaatgtcaatggca 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 catcccatctcttagtagagaaagcaactcttaagaggcaacttaaaaatgtcaatggca 688
Query: 599 caaaccaaaaggagaaggaacttctagaataccttttgtatttgttgatcaaatatgaga 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 caaaccaaaaggagaaggaacttctagaataccttttgtatttgttgatcaaatatgaga 748
Query: 659 aactcatttgccaggttcaaaatggaagccaaaccagtccttgaaac 705
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 aactcatttgccaggttcaaaatggaagccaaaccagtccttgaaac 795
Score = 54.0 bits (27), Expect = 1e-06
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 334 gcagttccaataccattggctgctgag 360
|||||||||||||||||||||||||||
Sbjct: 2 gcagttccaataccattggctgctgag 28