Miyakogusa Predicted Gene

Lj5g3v0104850.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v0104850.1 Non Chatacterized Hit- tr|A3AM88|A3AM88_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,56,7e-18,OS09G0392800 PROTEIN (FRAGMENT),NULL;
O-METHYLTRANSFERASE,NULL; no description,NULL; Maf,Maf-like
pr,CUFF.52600.1
         (399 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC57477 similar to UniRef100_A7NTC0 Cluster: Chromosome...   343   5e-94

>gnl|LJGI|TC57477 similar to UniRef100_A7NTC0 Cluster: Chromosome chr18 scaffold_1,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_1, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (86%)
          Length = 834

 Score =  343 bits (173), Expect = 5e-94
 Identities = 173/173 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcagccatttcttcatacaagattatactgggttcctcctccgtcgcacgccgcaag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75  atggcagccatttcttcatacaagattatactgggttcctcctccgtcgcacgccgcaag 134

                                                                       
Query: 61  atcttgtccgaaatgggataccaattcaccctaatgactgcagatatcgatgagaagagc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 atcttgtccgaaatgggataccaattcaccctaatgactgcagatatcgatgagaagagc 194

                                                                
Query: 121 atccggaaagaaactccagaagaattagttatggccctagctgaagccaaggc 173
           |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 atccggaaagaaactccagaagaattagttatggccctagctgaagccaaggc 247



 Score =  287 bits (145), Expect = 3e-77
 Identities = 145/145 (100%)
 Strand = Plus / Plus

                                                                       
Query: 255 agtggtggtctatgaaggtgtggttagggaaaagccatctagcaaagaagaagctcggca 314
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 agtggtggtctatgaaggtgtggttagggaaaagccatctagcaaagaagaagctcggca 385

                                                                       
Query: 315 gttcttgaaagattattctggaagacatgcagcaactgtgggatctgtactagtaacaaa 374
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 gttcttgaaagattattctggaagacatgcagcaactgtgggatctgtactagtaacaaa 445

                                    
Query: 375 tctcaaaacaggattgagaaaagga 399
           |||||||||||||||||||||||||
Sbjct: 446 tctcaaaacaggattgagaaaagga 470