Miyakogusa Predicted Gene
- Lj5g3v0091580.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0091580.1 Non Chatacterized Hit- tr|Q8LBD4|Q8LBD4_ARATH
Putative uncharacterized protein OS=Arabidopsis
thalia,50,2e-18,seg,NULL,gene.g58320.t1.1
(1713 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC61524 similar to UniRef100_A7QWV2 Cluster: Chromosome... 787 0.0
gnl|LJGI|FS324338 similar to UniRef100_A7QWV2 Cluster: Chromosom... 613 e-174
gnl|LJGI|TC65954 similar to UniRef100_A7QWV2 Cluster: Chromosome... 139 6e-32
gnl|LJGI|TC65354 similar to UniRef100_A7QWV2 Cluster: Chromosome... 62 1e-08
>gnl|LJGI|TC61524 similar to UniRef100_A7QWV2 Cluster: Chromosome chr13 scaffold_210,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_210, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (24%)
Length = 830
Score = 787 bits (397), Expect = 0.0
Identities = 400/401 (99%)
Strand = Plus / Plus
Query: 1313 gggcagcttatgtggagttcatgagtaaagaagctgcagataatgcattatcactggatg 1372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165 gggcagcttatgtggagttcatgagtaaagaagctgcagataatgcattatcactggatg 224
Query: 1373 gaacttccttcatgtcacgtattctcaaggttgtgaggaaaagtgctgcacctcaagagt 1432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 gaacttccttcatgtcacgtattctcaaggttgtgaggaaaagtgctgcacctcaagagt 284
Query: 1433 atgctccagccctgccatggccacgtggagttaggggatcaccatttccctctgctaggt 1492
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 atgctccagccctgccatggccacgtggagttaggggatcaccatttccctctgctaggt 344
Query: 1493 tttcaagagctcccttcccgagaggtgttgtcggggcatttagccctaggcccccagtta 1552
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 tttcaagagctcccttcccgagaggtgttgtcggggcatttagccctaggcccccagtta 404
Query: 1553 aatttggttccaggagcttgcaatggaagcgggatgctcagggtatttcatcagaaagta 1612
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 aatttggttccaggagcttgcaatggaagcgggatgctcagggtatttcatcagaaagta 464
Query: 1613 gtgcagcttcaaattacagcaatctttcttcacctggtgctcgaggtctcacctatgtga 1672
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 gtgcagcttcaaattacagcaatctttcttcacctggtgctcgaggtctcacctatgtga 524
Query: 1673 gaacagaatctaagctggatgccagcttgaattccacgtaa 1713
||||||||| |||||||||||||||||||||||||||||||
Sbjct: 525 gaacagaatttaagctggatgccagcttgaattccacgtaa 565
>gnl|LJGI|FS324338 similar to UniRef100_A7QWV2 Cluster: Chromosome chr13 scaffold_210,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_210, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (13%)
Length = 743
Score = 613 bits (309), Expect = e-174
Identities = 309/309 (100%)
Strand = Plus / Plus
Query: 44 ggttgtgggatcatttggctttgaatatagatttgtatgtacaatctaaagagttgcagg 103
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 ggttgtgggatcatttggctttgaatatagatttgtatgtacaatctaaagagttgcagg 494
Query: 104 atgaagctcccaaaagaaagcttatatcagaggtccaagctggaggtgatggttttcagc 163
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 atgaagctcccaaaagaaagcttatatcagaggtccaagctggaggtgatggttttcagc 554
Query: 164 atttgaattcacagtcagaaagagtagagtctaataagttatctagaagtcgccgtaaca 223
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 atttgaattcacagtcagaaagagtagagtctaataagttatctagaagtcgccgtaaca 614
Query: 224 aagattggaaaggattggtggggagagatactgaagcaccatacctttggaactctgagg 283
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 aagattggaaaggattggtggggagagatactgaagcaccatacctttggaactctgagg 674
Query: 284 ttgacaatgttcatttggaggaaaaagaccgatctaaagtcaatcgtggtccaaggttac 343
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 ttgacaatgttcatttggaggaaaaagaccgatctaaagtcaatcgtggtccaaggttac 734
Query: 344 aatctcctc 352
|||||||||
Sbjct: 735 aatctcctc 743
>gnl|LJGI|TC65954 similar to UniRef100_A7QWV2 Cluster: Chromosome chr13 scaffold_210,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_210, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (18%)
Length = 774
Score = 139 bits (70), Expect = 6e-32
Identities = 165/197 (83%), Gaps = 6/197 (3%)
Strand = Plus / Plus
Query: 47 tgtgggatcatttggctttgaatatagatttgtatgtacaatctaaagagttgcaggatg 106
||||||||||||||| ||||||| ||| ||| |||||| || || |||| ||||||| ||
Sbjct: 349 tgtgggatcatttggatttgaatttaggtttatatgtaaaacctgaagaattgcaggttg 408
Query: 107 aagctcccaaaagaaagcttatatcagaggtccaagctggaggtgatggttttcagcatt 166
||| ||| || | |||||||||| ||||||||||| || |||| |||||||||||
Sbjct: 409 aagatcctaa------ggttatatcagaagtccaagctgggggggatgtttttcagcatt 462
Query: 167 tgaattcacagtcagaaagagtagagtctaataagttatctagaagtcgccgtaacaaag 226
||||||||||||||||||| | | |||||||||||| |||||||||| ||||| | ||
Sbjct: 463 caaattcacagtcagaaagaggaaaatctaataagttacctagaagtcggcgtaatagag 522
Query: 227 attggaaaggattggtg 243
||||||||||| |||||
Sbjct: 523 attggaaaggactggtg 539
Score = 89.7 bits (45), Expect = 5e-17
Identities = 51/53 (96%)
Strand = Plus / Plus
Query: 435 tgctcctcgacggctgcttcagtttgcagtacgagatgcagtggctacttcaa 487
||||||||||||||||||||| |||||||| ||||||||||||||||||||||
Sbjct: 722 tgctcctcgacggctgcttcaatttgcagttcgagatgcagtggctacttcaa 774
>gnl|LJGI|TC65354 similar to UniRef100_A7QWV2 Cluster: Chromosome chr13 scaffold_210,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_210, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (7%)
Length = 807
Score = 61.9 bits (31), Expect = 1e-08
Identities = 109/135 (80%)
Strand = Plus / Plus
Query: 1463 ttaggggatcaccatttccctctgctaggttttcaagagctcccttcccgagaggtgttg 1522
|||||||||| |||||| | ||||||||||||| ||| |||||| || |||||| ||
Sbjct: 30 ttaggggatctccattttctactgctaggttttcccgagttccctttccaagaggtattc 89
Query: 1523 tcggggcatttagccctaggcccccagttaaatttggttccaggagcttgcaatggaagc 1582
|| || ||||| ||| |||| ||| | ||| | ||| | ||||| ||||||||||||
Sbjct: 90 ctggtgcttttagacctcggcctccattaaaagtgggtgctaggagtatgcaatggaagc 149
Query: 1583 gggatgctcagggta 1597
|||||||||||||||
Sbjct: 150 gggatgctcagggta 164