Miyakogusa Predicted Gene

Lj5g3v0089470.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v0089470.1 tr|B9I808|B9I808_POPTR Tir-nbs-lrr resistance
protein OS=Populus trichocarpa GN=POPTRDRAFT_571594
PE,35.26,0.0000000000008,TIR,Toll/interleukin-1 receptor homology
(TIR) domain; NB-ARC,NB-ARC; no description,NULL;
seg,NULL;,CUFF.52508.1
         (1680 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC68060 weakly similar to UniRef100_Q19PI9 Cluster: TIR...   406   e-112
gnl|LJGI|TC70355 weakly similar to UniRef100_A7PQ15 Cluster: Chr...    58   2e-07
gnl|LJGI|TC80360 weakly similar to UniRef100_A7QGI5 Cluster: Chr...    54   3e-06

>gnl|LJGI|TC68060 weakly similar to UniRef100_Q19PI9 Cluster: TIR-NBS-LRR type
           disease resistance protein; n=1; Populus
           trichocarpa|Rep: TIR-NBS-LRR type disease resistance
           protein - Populus trichocarpa (Western balsam poplar)
           (Populus balsamiferasubsp. trichocarpa), partial (15%)
          Length = 731

 Score =  406 bits (205), Expect = e-112
 Identities = 408/473 (86%), Gaps = 2/473 (0%)
 Strand = Plus / Plus

                                                                       
Query: 48  atggaaatatgatgtgtttgtgagctttagaggtgaagacacaaggaacaacttcactga 107
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 129 atggaaatatgatgtgtttgtgagctttagaggtgaagacacaagaaacaacttcactga 188

                                                                       
Query: 108 tcatcttttcggtgctctccaaagaaaaggctttgttactttcagggatgacactaagct 167
           ||||||||| ||||||||| |  |||||||||||||||||||||  |||||||| | |||
Sbjct: 189 tcatctttttggtgctctctatggaaaaggctttgttactttcaaagatgacaccatgct 248

                                                                       
Query: 168 cagaaaaggagaacagatatccactgagcttctacaagcaattgaagtatccaagatttt 227
            ||||||||  || | ||||||||||||||| ||||||||||||||| |||  | ||| |
Sbjct: 249 aagaaaaggtaaaaatatatccactgagcttatacaagcaattgaaggatcacaaattct 308

                                                                       
Query: 228 gattgtggtattctcagaaaactatgcttcttccacatggtgcttggaagaactggcaaa 287
           ||||||||| |||||| || |||||||||||||||||||||||||| |||||||||||||
Sbjct: 309 gattgtggtcttctcaaaatactatgcttcttccacatggtgcttgcaagaactggcaaa 368

                                                                       
Query: 288 gattgctgactgcattgaagtgccag-gacaaactgttctgcctattttctatgatgtga 346
            |||||||| |||||||||| |  || | || |||||||||||| |||||| ||||||||
Sbjct: 369 aattgctgattgcattgaag-gaaagaggcagactgttctgcctgttttctgtgatgtga 427

                                                                       
Query: 347 gtccatctgaggtgcgaaaacaaacctgggattatggaaaagcctttgcagatcatcaag 406
            ||||||||||||||| ||||||| | |  |||||||| |||| |||    | ||| |||
Sbjct: 428 ctccatctgaggtgcggaaacaaagcggaaattatggagaagcttttctgaagcatgaag 487

                                                                       
Query: 407 aaaggttcaaagaaaatttagggatggttcaaaaatggagggaagctctaacacaagtag 466
           |||| ||||||||| |||||   |||||||||| ||||||| |||||||| ||||||| |
Sbjct: 488 aaagattcaaagaagatttacaaatggttcaaagatggaggaaagctctagcacaagtgg 547

                                                                
Query: 467 ccaatctctctggctgggatgtgagggataagccacaatatgcagagattgga 519
           || |||||||||| |||||||| |   ||||||||||| ||||| ||||||||
Sbjct: 548 ccgatctctctggatgggatgtaacaaataagccacaagatgcacagattgga 600


>gnl|LJGI|TC70355 weakly similar to UniRef100_A7PQ15 Cluster: Chromosome chr18
           scaffold_24, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr18 scaffold_24, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (17%)
          Length = 1004

 Score = 58.0 bits (29), Expect = 2e-07
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                            
Query: 56  atgatgtgtttgtgagctttagaggtgaagaca 88
           ||||||| |||||||||||||||||||||||||
Sbjct: 274 atgatgtttttgtgagctttagaggtgaagaca 306


>gnl|LJGI|TC80360 weakly similar to UniRef100_A7QGI5 Cluster: Chromosome undetermined
           scaffold_92, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_92, whole
           genome shotgun sequence - Vitis vinifera (Grape),
           partial (47%)
          Length = 984

 Score = 54.0 bits (27), Expect = 3e-06
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                          
Query: 235 gtattctcagaaaactatgcttcttccacatggtgcttggaagaact 281
           |||||||||||||||||||||||||| |  ||||| ||||| |||||
Sbjct: 248 gtattctcagaaaactatgcttcttctaagtggtgtttggaggaact 294