Miyakogusa Predicted Gene
- Lj5g3v0086230.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0086230.1 Non Chatacterized Hit- tr|I1M8F2|I1M8F2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.45814
PE,76.37,0,seg,NULL; PEROXISOMAL BIOGENESIS FACTOR 11,Peroxisomal
biogenesis factor 11; PEX11,Peroxisomal bioge,CUFF.52501.1
(802 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC57223 similar to UniRef100_A7NTH2 Cluster: Chromosome... 1590 0.0
gnl|LJGI|TC76233 homologue to UniRef100_A7NTH5 Cluster: Chromoso... 700 0.0
gnl|LJGI|BW598906 72 6e-12
>gnl|LJGI|TC57223 similar to UniRef100_A7NTH2 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (84%)
Length = 1355
Score = 1590 bits (802), Expect = 0.0
Identities = 802/802 (100%)
Strand = Plus / Plus
Query: 1 atggattcagaacctccagctccgccgcagaacccgaagccaaccccaccaccaccgcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87 atggattcagaacctccagctccgccgcagaacccgaagccaaccccaccaccaccgcca 146
Query: 61 ccgagtgcaaccgccaccacaaaaccgaacgacaagagagactttctgaaccacgtggaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 ccgagtgcaaccgccaccacaaaaccgaacgacaagagagactttctgaaccacgtggaa 206
Query: 121 gcctacctcgccaagcgagacggcgtcgacaagcttctcaagatctcacgttacaccacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gcctacctcgccaagcgagacggcgtcgacaagcttctcaagatctcacgttacaccacc 266
Query: 181 aagctcctcctcgcctcttccccgaacctcctccgttcggacacgaacctctcccaacgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 aagctcctcctcgcctcttccccgaacctcctccgttcggacacgaacctctcccaacgc 326
Query: 241 ctcaaggccttcgagtccagcgtcggcgtcagccgcaaggccttcaggctcgggaagttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 ctcaaggccttcgagtccagcgtcggcgtcagccgcaaggccttcaggctcgggaagttc 386
Query: 301 gtgcaggatctcaacgcgctcggagcctccgatccaaaacgcgacctcgtgttctccgtc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 gtgcaggatctcaacgcgctcggagcctccgatccaaaacgcgacctcgtgttctccgtc 446
Query: 361 atcgcctacggcggcgaaggcttctactacttcgtggagcagttcgtgtggctggcgaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 atcgcctacggcggcgaaggcttctactacttcgtggagcagttcgtgtggctggcgaaa 506
Query: 421 tcggggttgatcgatccgaaacattcccgaacgttggggaagattagcgcctgggcggaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 tcggggttgatcgatccgaaacattcccgaacgttggggaagattagcgcctgggcggaa 566
Query: 481 ttcgttgggtacttcggaagcatcgcgttgaaattgagggatttgaggttgattatcgag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 ttcgttgggtacttcggaagcatcgcgttgaaattgagggatttgaggttgattatcgag 626
Query: 541 gatgaagcgtgcttgcaatcgagcgttgagattgcggggttgagaggggttgggtgtgga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 gatgaagcgtgcttgcaatcgagcgttgagattgcggggttgagaggggttgggtgtgga 686
Query: 601 gaagaagaagggaaattggggaagttgagggagaagaaactgatgaagcagctttcagtt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 gaagaagaagggaaattggggaagttgagggagaagaaactgatgaagcagctttcagtt 746
Query: 661 gttcaggatttggctgatggattgatggctttggatgatatattggatgggaaagcaccg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 gttcaggatttggctgatggattgatggctttggatgatatattggatgggaaagcaccg 806
Query: 721 ttttcgaagccgattttgctttcttctgcagggcttttgtctgctctcatcagcactcac 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 807 ttttcgaagccgattttgctttcttctgcagggcttttgtctgctctcatcagcactcac 866
Query: 781 aagaattgggtgtcttgctgag 802
||||||||||||||||||||||
Sbjct: 867 aagaattgggtgtcttgctgag 888
>gnl|LJGI|TC76233 homologue to UniRef100_A7NTH5 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (25%)
Length = 476
Score = 700 bits (353), Expect = 0.0
Identities = 356/357 (99%)
Strand = Plus / Plus
Query: 1 atggattcagaacctccagctccgccgcagaacccgaagccaaccccaccaccaccgcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 atggattcagaacctccagctccgccgcagaacccgaagccaaccccaccaccaccgcca 179
Query: 61 ccgagtgcaaccgccaccacaaaaccgaacgacaagagagactttctgaaccacgtggaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 ccgagtgcaaccgccaccacaaaaccgaacgacaagagagactttctgaaccacgtggaa 239
Query: 121 gcctacctcgccaagcgagacggcgtcgacaagcttctcaagatctcacgttacaccacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 gcctacctcgccaagcgagacggcgtcgacaagcttctcaagatctcacgttacaccacc 299
Query: 181 aagctcctcctcgcctcttccccgaacctcctccgttcggacacgaacctctcccaacgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 aagctcctcctcgcctcttccccgaacctcctccgttcggacacgaacctctcccaacgc 359
Query: 241 ctcaaggccttcgagtccagcgtcggcgtcagccgcaaggccttcaggctcgggaagttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 ctcaaggccttcgagtccagcgtcggcgtcagccgcaaggccttcaggctcgggaagttc 419
Query: 301 gtgcaggatctcaacgcgctcggagcctccgatccaaaacgcgacctcgtgttctcc 357
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 420 gtgcaggatctcaacgcgctccgagcctccgatccaaaacgcgacctcgtgttctcc 476
>gnl|LJGI|BW598906
Length = 452
Score = 71.9 bits (36), Expect = 6e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 519 ggatttgaggttgattatcgaggatgaagcgtgcttgcaatcgagcgttgag 570
|||||||||||||||||||||| ||| ||||||||||| || ||||||||||
Sbjct: 258 ggatttgaggttgattatcgagaatggagcgtgcttgcgattgagcgttgag 207