Miyakogusa Predicted Gene

Lj5g3v0086230.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v0086230.1 Non Chatacterized Hit- tr|I1M8F2|I1M8F2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.45814
PE,76.37,0,seg,NULL; PEROXISOMAL BIOGENESIS FACTOR 11,Peroxisomal
biogenesis factor 11; PEX11,Peroxisomal bioge,CUFF.52501.1
         (802 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC57223 similar to UniRef100_A7NTH2 Cluster: Chromosome...  1590   0.0  
gnl|LJGI|TC76233 homologue to UniRef100_A7NTH5 Cluster: Chromoso...   700   0.0  
gnl|LJGI|BW598906                                                      72   6e-12

>gnl|LJGI|TC57223 similar to UniRef100_A7NTH2 Cluster: Chromosome chr18 scaffold_1,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_1, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (84%)
          Length = 1355

 Score = 1590 bits (802), Expect = 0.0
 Identities = 802/802 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggattcagaacctccagctccgccgcagaacccgaagccaaccccaccaccaccgcca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87  atggattcagaacctccagctccgccgcagaacccgaagccaaccccaccaccaccgcca 146

                                                                       
Query: 61  ccgagtgcaaccgccaccacaaaaccgaacgacaagagagactttctgaaccacgtggaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 ccgagtgcaaccgccaccacaaaaccgaacgacaagagagactttctgaaccacgtggaa 206

                                                                       
Query: 121 gcctacctcgccaagcgagacggcgtcgacaagcttctcaagatctcacgttacaccacc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gcctacctcgccaagcgagacggcgtcgacaagcttctcaagatctcacgttacaccacc 266

                                                                       
Query: 181 aagctcctcctcgcctcttccccgaacctcctccgttcggacacgaacctctcccaacgc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 aagctcctcctcgcctcttccccgaacctcctccgttcggacacgaacctctcccaacgc 326

                                                                       
Query: 241 ctcaaggccttcgagtccagcgtcggcgtcagccgcaaggccttcaggctcgggaagttc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 ctcaaggccttcgagtccagcgtcggcgtcagccgcaaggccttcaggctcgggaagttc 386

                                                                       
Query: 301 gtgcaggatctcaacgcgctcggagcctccgatccaaaacgcgacctcgtgttctccgtc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 gtgcaggatctcaacgcgctcggagcctccgatccaaaacgcgacctcgtgttctccgtc 446

                                                                       
Query: 361 atcgcctacggcggcgaaggcttctactacttcgtggagcagttcgtgtggctggcgaaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 atcgcctacggcggcgaaggcttctactacttcgtggagcagttcgtgtggctggcgaaa 506

                                                                       
Query: 421 tcggggttgatcgatccgaaacattcccgaacgttggggaagattagcgcctgggcggaa 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 tcggggttgatcgatccgaaacattcccgaacgttggggaagattagcgcctgggcggaa 566

                                                                       
Query: 481 ttcgttgggtacttcggaagcatcgcgttgaaattgagggatttgaggttgattatcgag 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 ttcgttgggtacttcggaagcatcgcgttgaaattgagggatttgaggttgattatcgag 626

                                                                       
Query: 541 gatgaagcgtgcttgcaatcgagcgttgagattgcggggttgagaggggttgggtgtgga 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 gatgaagcgtgcttgcaatcgagcgttgagattgcggggttgagaggggttgggtgtgga 686

                                                                       
Query: 601 gaagaagaagggaaattggggaagttgagggagaagaaactgatgaagcagctttcagtt 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 gaagaagaagggaaattggggaagttgagggagaagaaactgatgaagcagctttcagtt 746

                                                                       
Query: 661 gttcaggatttggctgatggattgatggctttggatgatatattggatgggaaagcaccg 720
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 gttcaggatttggctgatggattgatggctttggatgatatattggatgggaaagcaccg 806

                                                                       
Query: 721 ttttcgaagccgattttgctttcttctgcagggcttttgtctgctctcatcagcactcac 780
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 807 ttttcgaagccgattttgctttcttctgcagggcttttgtctgctctcatcagcactcac 866

                                 
Query: 781 aagaattgggtgtcttgctgag 802
           ||||||||||||||||||||||
Sbjct: 867 aagaattgggtgtcttgctgag 888


>gnl|LJGI|TC76233 homologue to UniRef100_A7NTH5 Cluster: Chromosome chr18 scaffold_1,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_1, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (25%)
          Length = 476

 Score =  700 bits (353), Expect = 0.0
 Identities = 356/357 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggattcagaacctccagctccgccgcagaacccgaagccaaccccaccaccaccgcca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 atggattcagaacctccagctccgccgcagaacccgaagccaaccccaccaccaccgcca 179

                                                                       
Query: 61  ccgagtgcaaccgccaccacaaaaccgaacgacaagagagactttctgaaccacgtggaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 ccgagtgcaaccgccaccacaaaaccgaacgacaagagagactttctgaaccacgtggaa 239

                                                                       
Query: 121 gcctacctcgccaagcgagacggcgtcgacaagcttctcaagatctcacgttacaccacc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 gcctacctcgccaagcgagacggcgtcgacaagcttctcaagatctcacgttacaccacc 299

                                                                       
Query: 181 aagctcctcctcgcctcttccccgaacctcctccgttcggacacgaacctctcccaacgc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 aagctcctcctcgcctcttccccgaacctcctccgttcggacacgaacctctcccaacgc 359

                                                                       
Query: 241 ctcaaggccttcgagtccagcgtcggcgtcagccgcaaggccttcaggctcgggaagttc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 ctcaaggccttcgagtccagcgtcggcgtcagccgcaaggccttcaggctcgggaagttc 419

                                                                    
Query: 301 gtgcaggatctcaacgcgctcggagcctccgatccaaaacgcgacctcgtgttctcc 357
           ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 420 gtgcaggatctcaacgcgctccgagcctccgatccaaaacgcgacctcgtgttctcc 476


>gnl|LJGI|BW598906 
          Length = 452

 Score = 71.9 bits (36), Expect = 6e-12
 Identities = 48/52 (92%)
 Strand = Plus / Minus

                                                               
Query: 519 ggatttgaggttgattatcgaggatgaagcgtgcttgcaatcgagcgttgag 570
           |||||||||||||||||||||| ||| ||||||||||| || ||||||||||
Sbjct: 258 ggatttgaggttgattatcgagaatggagcgtgcttgcgattgagcgttgag 207