Miyakogusa Predicted Gene
- Lj5g3v0083000.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0083000.1 Non Chatacterized Hit- tr|F6I443|F6I443_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,51.61,2e-16,Glucocorticoid receptor-like (DNA-binding
domain),NULL; no description,Zinc finger, LIM-type;
DUF363,CUFF.52505.1
(1266 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58401 similar to UniRef100_A7NTJ6 Cluster: Chromosome... 1181 0.0
gnl|LJGI|TC73785 weakly similar to UniRef100_A7NTJ6 Cluster: Chr... 886 0.0
gnl|LJGI|TC81400 similar to UniRef100_A7PV25 Cluster: Chromosome... 672 0.0
gnl|LJGI|TC72642 weakly similar to UniRef100_A7NTJ6 Cluster: Chr... 583 e-165
gnl|LJGI|TC70070 similar to UniRef100_UPI0000162E0B Cluster: ubi... 432 e-120
gnl|LJGI|AV415387 similar to UniRef100_A7NTJ6 Cluster: Chromosom... 293 1e-78
gnl|LJGI|FS332184 280 2e-74
gnl|LJGI|TC71226 88 2e-16
gnl|LJGI|TC63537 similar to UniRef100_A7PV25 Cluster: Chromosome... 58 1e-07
>gnl|LJGI|TC58401 similar to UniRef100_A7NTJ6 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (32%)
Length = 784
Score = 1181 bits (596), Expect = 0.0
Identities = 596/596 (100%)
Strand = Plus / Plus
Query: 1 atgggttggcttagcagaatttttaaaggctctgaacataaggtttcagaagggcattac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 atgggttggcttagcagaatttttaaaggctctgaacataaggtttcagaagggcattac 248
Query: 61 tataaagaggatgcagattattacttgccttcaacttcaggggatgtttggactgagaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 tataaagaggatgcagattattacttgccttcaacttcaggggatgtttggactgagaac 308
Query: 121 aatgatgaagaaatcgatcgcgctattgcactgtctctggcagaagaaaatcagaaacca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 aatgatgaagaaatcgatcgcgctattgcactgtctctggcagaagaaaatcagaaacca 368
Query: 181 aaccgtgtaaatgactacagatcacaattagaagatgacgaacaacttgctagagccata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 aaccgtgtaaatgactacagatcacaattagaagatgacgaacaacttgctagagccata 428
Query: 241 gaagaaagcttaaatttggagccccctcctagacatggaaatgaaaacatgtatcaacca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 gaagaaagcttaaatttggagccccctcctagacatggaaatgaaaacatgtatcaacca 488
Query: 301 gctcatcaaccagttcagtatttcccaatgggatacaggatttgtgctcgctgcaatatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 gctcatcaaccagttcagtatttcccaatgggatacaggatttgtgctcgctgcaatatg 548
Query: 361 gagattggttatggacgatatctaaattgcttgaatgcattctggcatcctgaatgcttc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 gagattggttatggacgatatctaaattgcttgaatgcattctggcatcctgaatgcttc 608
Query: 421 cgctgccgtgcttgcaacctaccaatcactgattatgagttctccacatctgggaactac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 cgctgccgtgcttgcaacctaccaatcactgattatgagttctccacatctgggaactac 668
Query: 481 ccttaccataaaccatgctataaagaaagctaccatccgaaatgtgatgtctgcaagcac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 ccttaccataaaccatgctataaagaaagctaccatccgaaatgtgatgtctgcaagcac 728
Query: 541 ttcattccaacaaaccctgctggtcttattgaatatagggcacatccattctggat 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 729 ttcattccaacaaaccctgctggtcttattgaatatagggcacatccattctggat 784
>gnl|LJGI|TC73785 weakly similar to UniRef100_A7NTJ6 Cluster: Chromosome chr18
scaffold_1, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr18 scaffold_1, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (22%)
Length = 694
Score = 886 bits (447), Expect = 0.0
Identities = 450/451 (99%)
Strand = Plus / Plus
Query: 1 atgggttggcttagcagaatttttaaaggctctgaacataaggtttcagaagggcattac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 atgggttggcttagcagaatttttaaaggctctgaacataaggtttcagaagggcattac 303
Query: 61 tataaagaggatgcagattattacttgccttcaacttcaggggatgtttggactgagaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 tataaagaggatgcagattattacttgccttcaacttcaggggatgtttggactgagaac 363
Query: 121 aatgatgaagaaatcgatcgcgctattgcactgtctctggcagaagaaaatcagaaacca 180
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 364 aatgatgaagaaatcgatcgcgctattgcactgtcactggcagaagaaaatcagaaacca 423
Query: 181 aaccgtgtaaatgactacagatcacaattagaagatgacgaacaacttgctagagccata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 aaccgtgtaaatgactacagatcacaattagaagatgacgaacaacttgctagagccata 483
Query: 241 gaagaaagcttaaatttggagccccctcctagacatggaaatgaaaacatgtatcaacca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 gaagaaagcttaaatttggagccccctcctagacatggaaatgaaaacatgtatcaacca 543
Query: 301 gctcatcaaccagttcagtatttcccaatgggatacaggatttgtgctcgctgcaatatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 gctcatcaaccagttcagtatttcccaatgggatacaggatttgtgctcgctgcaatatg 603
Query: 361 gagattggttatggacgatatctaaattgcttgaatgcattctggcatcctgaatgcttc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 gagattggttatggacgatatctaaattgcttgaatgcattctggcatcctgaatgcttc 663
Query: 421 cgctgccgtgcttgcaacctaccaatcactg 451
|||||||||||||||||||||||||||||||
Sbjct: 664 cgctgccgtgcttgcaacctaccaatcactg 694
>gnl|LJGI|TC81400 similar to UniRef100_A7PV25 Cluster: Chromosome chr4 scaffold_32,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_32, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (24%)
Length = 832
Score = 672 bits (339), Expect = 0.0
Identities = 339/339 (100%)
Strand = Plus / Plus
Query: 775 cagaaattttatgaaagcctagatatgaaactggatcagcaagttccgctactgttagtt 834
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 cagaaattttatgaaagcctagatatgaaactggatcagcaagttccgctactgttagtt 280
Query: 835 gaaagagaagctctgaatgaagcaagagagggagagaagaatggtcactatcacatgcct 894
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 gaaagagaagctctgaatgaagcaagagagggagagaagaatggtcactatcacatgcct 340
Query: 895 gagaccagaggactctgcctctcagaggaactcagcactatttcaagacgaccaagacat 954
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 gagaccagaggactctgcctctcagaggaactcagcactatttcaagacgaccaagacat 400
Query: 955 gggaagggaaatagggcaatggaccagagaacacagccctacaaactgactgcacgttgt 1014
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 gggaagggaaatagggcaatggaccagagaacacagccctacaaactgactgcacgttgt 460
Query: 1015 gatgtgacagcaattctcattttatatggtcttccaaggttgcttactgggtcaatccta 1074
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 gatgtgacagcaattctcattttatatggtcttccaaggttgcttactgggtcaatccta 520
Query: 1075 gctcacgagatgatgcatgcatggctgcggctaaaaggt 1113
|||||||||||||||||||||||||||||||||||||||
Sbjct: 521 gctcacgagatgatgcatgcatggctgcggctaaaaggt 559
>gnl|LJGI|TC72642 weakly similar to UniRef100_A7NTJ6 Cluster: Chromosome chr18
scaffold_1, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr18 scaffold_1, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (14%)
Length = 679
Score = 583 bits (294), Expect = e-165
Identities = 321/330 (97%)
Strand = Plus / Plus
Query: 1 atgggttggcttagcagaatttttaaaggctctgaacataaggtttcagaagggcattac 60
||||||||||||| || ||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 350 atgggttggcttaccaaaatttttaaaggctctgaacataaggtttcaaaagggcattac 409
Query: 61 tataaagaggatgcagattattacttgccttcaacttcaggggatgtttggactgagaac 120
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 tataaagaggatgcaaattattacttgccttcaacttcaggggatgtttggactgagaac 469
Query: 121 aatgatgaagaaatcgatcgcgctattgcactgtctctggcagaagaaaatcagaaacca 180
||||||||| |||||||||||||||||||||||||||||||| |||||||||| ||||||
Sbjct: 470 aatgatgaaaaaatcgatcgcgctattgcactgtctctggcaaaagaaaatcaaaaacca 529
Query: 181 aaccgtgtaaatgactacagatcacaattagaagatgacgaacaacttgctagagccata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 aaccgtgtaaatgactacagatcacaattagaagatgacgaacaacttgctagagccata 589
Query: 241 gaagaaagcttaaatttggagccccctcctagacatggaaatgaaaacatgtatcaacca 300
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 aaaaaaagcttaaatttggagccccctcctagacatggaaatgaaaacatgtatcaacca 649
Query: 301 gctcatcaaccagttcagtatttcccaatg 330
||||||||||||||||||||||||||||||
Sbjct: 650 gctcatcaaccagttcagtatttcccaatg 679
>gnl|LJGI|TC70070 similar to UniRef100_UPI0000162E0B Cluster: ubiquitin interaction
motif-containing protein / LIM domain-containing protein;
n=1; Arabidopsis thaliana|Rep: ubiquitin interaction
motif-containing protein / LIM domain-containing protein
- Arabidopsis thaliana, partial (21%)
Length = 627
Score = 432 bits (218), Expect = e-120
Identities = 218/218 (100%)
Strand = Plus / Plus
Query: 1031 tcattttatatggtcttccaaggttgcttactgggtcaatcctagctcacgagatgatgc 1090
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcattttatatggtcttccaaggttgcttactgggtcaatcctagctcacgagatgatgc 60
Query: 1091 atgcatggctgcggctaaaaggtgttcgaactctgagtcaagatgttgaagaaggtatct 1150
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atgcatggctgcggctaaaaggtgttcgaactctgagtcaagatgttgaagaaggtatct 120
Query: 1151 gtcaggttttggctcatatatggttggagtctgagctatcttctgcaccagccggcaact 1210
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcaggttttggctcatatatggttggagtctgagctatcttctgcaccagccggcaact 180
Query: 1211 tcgtctcaacatcatcctcaccagcaccatatacatct 1248
||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tcgtctcaacatcatcctcaccagcaccatatacatct 218
>gnl|LJGI|AV415387 similar to UniRef100_A7NTJ6 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 150
Score = 293 bits (148), Expect = 1e-78
Identities = 148/148 (100%)
Strand = Plus / Plus
Query: 607 tgcccttctcatgaacatgataatactcctcgctgttgtagctgtgagcgaatggagcca 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 tgcccttctcatgaacatgataatactcctcgctgttgtagctgtgagcgaatggagcca 62
Query: 667 cgagaggcgggatatatccctcttaaggatggcaggaagctctgcttagagtgtctggat 726
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 cgagaggcgggatatatccctcttaaggatggcaggaagctctgcttagagtgtctggat 122
Query: 727 tcttctatcatggatacaaacgaatgtc 754
||||||||||||||||||||||||||||
Sbjct: 123 tcttctatcatggatacaaacgaatgtc 150
>gnl|LJGI|FS332184
Length = 465
Score = 280 bits (141), Expect = 2e-74
Identities = 144/145 (99%)
Strand = Plus / Plus
Query: 1 atgggttggcttagcagaatttttaaaggctctgaacataaggtttcagaagggcattac 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 321 atgggttggcttagcagaatttttaaaggctctgaacataaggtttcagaatggcattac 380
Query: 61 tataaagaggatgcagattattacttgccttcaacttcaggggatgtttggactgagaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tataaagaggatgcagattattacttgccttcaacttcaggggatgtttggactgagaac 440
Query: 121 aatgatgaagaaatcgatcgcgcta 145
|||||||||||||||||||||||||
Sbjct: 441 aatgatgaagaaatcgatcgcgcta 465
>gnl|LJGI|TC71226
Length = 892
Score = 87.7 bits (44), Expect = 2e-16
Identities = 143/176 (81%)
Strand = Plus / Plus
Query: 1012 tgtgatgtgacagcaattctcattttatatggtcttccaaggttgcttactgggtcaatc 1071
||||| |||||||| ||||| |||| || || ||||| || || || || || ||||||
Sbjct: 206 tgtgaagtgacagctattcttgttttgtacggccttcctagattactgacaggatcaatc 265
Query: 1072 ctagctcacgagatgatgcatgcatggctgcggctaaaaggtgttcgaactctgagtcaa 1131
|||||||| |||||||||||||||||||| |||| |||||| || | ||||||| |
Sbjct: 266 ctagctcatgagatgatgcatgcatggctcaggcttaaaggttatcccaacctgagtcca 325
Query: 1132 gatgttgaagaaggtatctgtcaggttttggctcatatatggttggagtctgagct 1187
|| ||||||||||| ||||| || || || |||||||| ||||| ||||| |||||
Sbjct: 326 gaagttgaagaaggaatctgccaagtcttagctcatatgtggttagagtcagagct 381
>gnl|LJGI|TC63537 similar to UniRef100_A7PV25 Cluster: Chromosome chr4 scaffold_32,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_32, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (61%)
Length = 1435
Score = 58.0 bits (29), Expect = 1e-07
Identities = 77/93 (82%)
Strand = Plus / Plus
Query: 559 gctggtcttattgaatatagggcacatccattctggatccagaaatattgcccttctcat 618
||||| || ||||| ||||| |||||||| ||||||| || |||||||| || || |||
Sbjct: 23 gctggcctcattgagtatagagcacatcctttctggacacaaaaatattgtccctcgcat 82
Query: 619 gaacatgataatactcctcgctgttgtagctgt 651
|||| |||| |||||||| ||||||||||||
Sbjct: 83 gaacgtgatgggactcctcgatgttgtagctgt 115