Miyakogusa Predicted Gene
- Lj5g3v0081970.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0081970.1 tr|Q67UT5|Q67UT5_ORYSJ F-box protein-like protein
OS=Oryza sativa subsp. japonica GN=P0046G12.31
PE=,27.36,2e-18,LRR_2,Leucine-rich repeat 2; FAMILY NOT NAMED,NULL; no
description,NULL; seg,NULL,CUFF.52481.1
(1287 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BW600067 similar to UniRef100_A7NTK0 Cluster: Chromosom... 876 0.0
gnl|LJGI|FS351262 573 e-162
gnl|LJGI|BP058204 121 1e-26
gnl|LJGI|CB826882 UniRef100_A0PBZ8 Cluster: Phenylalanine ammoni... 72 9e-12
>gnl|LJGI|BW600067 similar to UniRef100_A7NTK0 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (20%)
Length = 452
Score = 876 bits (442), Expect = 0.0
Identities = 445/446 (99%)
Strand = Plus / Plus
Query: 829 agctactttctgaagtatttgacaatagggtttgtgccggagaagcttcctagaccttgc 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7 agctactttctgaagtatttgacaatagggtttgtgccggagaagcttcctagaccttgc 66
Query: 889 attgatctgacttatctctccatacgcatgaacttctatgatgtgaaggaaatttcaggt 948
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67 attgatctgacttatctctccatacgcatgaacttctatgatgtgaaggaaatttcaggt 126
Query: 949 gctctttgcctattaagaagctcacctaatctacaagaactagaaatattgactcgatct 1008
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 127 gctctttgcctattaagaagctcacctaatctacaagaactataaatattgactcgatct 186
Query: 1009 gaggagccgaatgttctgttagcacaaccctattgctgggaagatttctatttgaatttc 1068
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 gaggagccgaatgttctgttagcacaaccctattgctgggaagatttctatttgaatttc 246
Query: 1069 ccagtcatgcaactgcgacatgtgaggatagatggcgtgtctgatttcaaggctgaatta 1128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 ccagtcatgcaactgcgacatgtgaggatagatggcgtgtctgatttcaaggctgaatta 306
Query: 1129 gattttatcagcttcctcttactgtattctcctgtgttagaaaggatgactgtgaagcct 1188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 gattttatcagcttcctcttactgtattctcctgtgttagaaaggatgactgtgaagcct 366
Query: 1189 ataaacctcgagctagggttgatgaaagagctgatgaaagaactaatgcggttcaagaga 1248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 ataaacctcgagctagggttgatgaaagagctgatgaaagaactaatgcggttcaagaga 426
Query: 1249 gcctcagctcgagctgaacttatttt 1274
||||||||||||||||||||||||||
Sbjct: 427 gcctcagctcgagctgaacttatttt 452
>gnl|LJGI|FS351262
Length = 630
Score = 573 bits (289), Expect = e-162
Identities = 289/289 (100%)
Strand = Plus / Minus
Query: 999 gactcgatctgaggagccgaatgttctgttagcacaaccctattgctgggaagatttcta 1058
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 gactcgatctgaggagccgaatgttctgttagcacaaccctattgctgggaagatttcta 282
Query: 1059 tttgaatttcccagtcatgcaactgcgacatgtgaggatagatggcgtgtctgatttcaa 1118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 tttgaatttcccagtcatgcaactgcgacatgtgaggatagatggcgtgtctgatttcaa 222
Query: 1119 ggctgaattagattttatcagcttcctcttactgtattctcctgtgttagaaaggatgac 1178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 ggctgaattagattttatcagcttcctcttactgtattctcctgtgttagaaaggatgac 162
Query: 1179 tgtgaagcctataaacctcgagctagggttgatgaaagagctgatgaaagaactaatgcg 1238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 tgtgaagcctataaacctcgagctagggttgatgaaagagctgatgaaagaactaatgcg 102
Query: 1239 gttcaagagagcctcagctcgagctgaacttattttcctagaatcttga 1287
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101 gttcaagagagcctcagctcgagctgaacttattttcctagaatcttga 53
Score = 143 bits (72), Expect = 3e-33
Identities = 72/72 (100%)
Strand = Plus / Minus
Query: 928 gatgtgaaggaaatttcaggtgctctttgcctattaagaagctcacctaatctacaagaa 987
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 gatgtgaaggaaatttcaggtgctctttgcctattaagaagctcacctaatctacaagaa 571
Query: 988 ctagaaatattg 999
||||||||||||
Sbjct: 570 ctagaaatattg 559
>gnl|LJGI|BP058204
Length = 365
Score = 121 bits (61), Expect = 1e-26
Identities = 110/125 (88%), Gaps = 1/125 (0%)
Strand = Plus / Minus
Query: 871 aagcttcctagaccttgcattgatctgact-tatctctccatacgcatgaacttctatga 929
|||||||||||||||||||||| | | | ||||||||||| | |||| ||||| ||||
Sbjct: 253 aagcttcctagaccttgcattgggttcaatgtatctctccatgctcatgcacttcaatga 194
Query: 930 tgtgaaggaaatttcaggtgctctttgcctattaagaagctcacctaatctacaagaact 989
| |||||||||||||||||||||||| ||| |||||||||| ||| ||||||||||||||
Sbjct: 193 tttgaaggaaatttcaggtgctctttacctgttaagaagcttaccgaatctacaagaact 134
Query: 990 agaaa 994
|||||
Sbjct: 133 agaaa 129
>gnl|LJGI|CB826882 UniRef100_A0PBZ8 Cluster: Phenylalanine ammonia-lyase; n=1; Lotus
japonicus|Rep: Phenylalanine ammonia-lyase - Lotus
japonicus, partial (23%)
Length = 364
Score = 71.9 bits (36), Expect = 9e-12
Identities = 74/84 (88%), Gaps = 2/84 (2%)
Strand = Plus / Plus
Query: 916 atgaacttctatgatgtgaaggaaatttcaggtgctctttgcctattaagaagctcacct 975
||||||||| ||||| ||||||||||||||||||||| || | | ||||||||| |||||
Sbjct: 279 atgaacttcaatgatctgaaggaaatttcaggtgctcctttcttgttaagaagcccacct 338
Query: 976 aatctacaagaactagaaatattg 999
||||| |||||||||||| ||||
Sbjct: 339 -atcta-aagaactagaaacattg 360