Miyakogusa Predicted Gene

Lj5g3v0081960.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v0081960.1 Non Chatacterized Hit- tr|I1M8G7|I1M8G7_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,80.28,0,MATE EFFLUX
FAMILY PROTEIN,NULL; MULTIDRUG RESISTANCE PROTEIN,NULL; seg,NULL;
MatE,Multi antimicrobi,CUFF.52480.1
         (657 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|DC597575 similar to UniRef100_A7NTK1 Cluster: Chromosom...   389   e-107
gnl|LJGI|TC79646 similar to UniRef100_A7QG49 Cluster: Chromosome...    56   3e-07
gnl|LJGI|TC77314 similar to UniRef100_Q4ABV9 Cluster: 4D11_28; n...    52   4e-06

>gnl|LJGI|DC597575 similar to UniRef100_A7NTK1 Cluster: Chromosome chr18 scaffold_1,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_1, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (12%)
          Length = 416

 Score =  389 bits (196), Expect = e-107
 Identities = 196/196 (100%)
 Strand = Plus / Minus

                                                                       
Query: 462 attaccagcagggatattgttgggattcacatttcattttggagcagagggtatttggtc 521
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 attaccagcagggatattgttgggattcacatttcattttggagcagagggtatttggtc 357

                                                                       
Query: 522 agggatgattggtggtacagttctgcagaccataatccttataatcgttacttcagtaac 581
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 agggatgattggtggtacagttctgcagaccataatccttataatcgttacttcagtaac 297

                                                                       
Query: 582 gaactggaagaaggaggctgaacaagcagagggtcgcatgaagagatggggaggatcaat 641
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 gaactggaagaaggaggctgaacaagcagagggtcgcatgaagagatggggaggatcaat 237

                           
Query: 642 tgctaatgaacaatga 657
           ||||||||||||||||
Sbjct: 236 tgctaatgaacaatga 221


>gnl|LJGI|TC79646 similar to UniRef100_A7QG49 Cluster: Chromosome undetermined
           scaffold_91, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_91, whole
           genome shotgun sequence - Vitis vinifera (Grape),
           partial (38%)
          Length = 897

 Score = 56.0 bits (28), Expect = 3e-07
 Identities = 64/76 (84%)
 Strand = Plus / Plus

                                                                       
Query: 362 ttcttaacagccttcaaccagtcttatctggtgttgctgttggagctgggtggcaagctc 421
           ||||||||||  ||||||||||  | || |||||||||||||||| ||||||||| || |
Sbjct: 303 ttcttaacagtgttcaaccagtgatttcaggtgttgctgttggaggtgggtggcaggccc 362

                           
Query: 422 ttgtagcatacatcaa 437
           | || || ||||||||
Sbjct: 363 tggtggcttacatcaa 378


>gnl|LJGI|TC77314 similar to UniRef100_Q4ABV9 Cluster: 4D11_28; n=1; Brassica rapa
           subsp. pekinensis|Rep: 4D11_28 - Brassica rapa subsp.
           pekinensis (Chinese cabbage), partial (37%)
          Length = 731

 Score = 52.0 bits (26), Expect = 4e-06
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                         
Query: 407 ctgggtggcaagctcttgtagcatacatcaacattgggtgctacta 452
           |||| ||||||||  ||||||||||||| ||||| |||||||||||
Sbjct: 242 ctggatggcaagcatttgtagcatacataaacatagggtgctacta 287