Miyakogusa Predicted Gene

Lj5g3v0080880.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v0080880.1 Non Chatacterized Hit- tr|Q8LCG5|Q8LCG5_ARATH
Putative uncharacterized protein OS=Arabidopsis
thalia,54.87,2e-19,seg,NULL,CUFF.52474.1
         (480 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO010263 similar to UniRef100_A7QH21 Cluster: Chromosom...   363   e-100
gnl|LJGI|TC60996 weakly similar to UniRef100_A7QH21 Cluster: Chr...   357   4e-98

>gnl|LJGI|GO010263 similar to UniRef100_A7QH21 Cluster: Chromosome chr3 scaffold_95,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr3 scaffold_95, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (54%)
          Length = 458

 Score =  363 bits (183), Expect = e-100
 Identities = 249/271 (91%)
 Strand = Plus / Plus

                                                                       
Query: 133 actgccccagttcccccaagccaacttttagggaaggttagagacttcctaggagtgatg 192
           |||||||||||||  || ||||| |||||||||||||||| |||||||||||||||||||
Sbjct: 138 actgccccagttcaacctagccagcttttagggaaggttaaagacttcctaggagtgatg 197

                                                                       
Query: 193 tcagaagctaataagcggctggaacttgatgcaaaggaccatcctgagaattataatatt 252
           |||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 198 tcagaagcaaataaacggctagaacttgatgcaaaggaccatcctgagaattataatatt 257

                                                                       
Query: 253 gaagagttaactggaaatgaatcccaagttattgaaatggatttgatgcttggtgttgct 312
           |||||| |||||||||||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 258 gaagagctaactggaaatgaaaccaaagttattgaaatggatttgatgcttggtgttgct 317

                                                                       
Query: 313 gatcttcatacacctgaggctgtggctgctgctgaatctgctgtttccagtcatgagcct 372
           |||||||||||||||||||||||||||||||||||||| ||| || |||||  | ||| |
Sbjct: 318 gatcttcatacacctgaggctgtggctgctgctgaatcagctattaccagtggtcagcat 377

                                          
Query: 373 gtgattccattggccggtgatgatagtgaaa 403
           |||||| ||||||| | ||||| ||||||||
Sbjct: 378 gtgatttcattggctgctgatggtagtgaaa 408



 Score = 65.9 bits (33), Expect = 2e-10
 Identities = 39/41 (95%)
 Strand = Plus / Plus

                                                   
Query: 1  atggcagagaggagcaaagagcttcttcagtttgagcacaa 41
          |||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 15 atggcagagaggagcaaagagcttctccagttggagcacaa 55


>gnl|LJGI|TC60996 weakly similar to UniRef100_A7QH21 Cluster: Chromosome chr3
           scaffold_95, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr3 scaffold_95, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (51%)
          Length = 747

 Score =  357 bits (180), Expect = 4e-98
 Identities = 246/268 (91%)
 Strand = Plus / Plus

                                                                       
Query: 136 gccccagttcccccaagccaacttttagggaaggttagagacttcctaggagtgatgtca 195
           ||||||||||  || ||||| |||||||||||||||| ||||||||||||||||||||||
Sbjct: 181 gccccagttcaacctagccagcttttagggaaggttaaagacttcctaggagtgatgtca 240

                                                                       
Query: 196 gaagctaataagcggctggaacttgatgcaaaggaccatcctgagaattataatattgaa 255
           ||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gaagcaaataaacggctagaacttgatgcaaaggaccatcctgagaattataatattgaa 300

                                                                       
Query: 256 gagttaactggaaatgaatcccaagttattgaaatggatttgatgcttggtgttgctgat 315
           ||| |||||||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gagctaactggaaatgaaaccaaagttattgaaatggatttgatgcttggtgttgctgat 360

                                                                       
Query: 316 cttcatacacctgaggctgtggctgctgctgaatctgctgtttccagtcatgagcctgtg 375
           ||||||||||||||||||||||||||||||||||| ||| || |||||  | ||| ||||
Sbjct: 361 cttcatacacctgaggctgtggctgctgctgaatcagctattaccagtggtcagcatgtg 420

                                       
Query: 376 attccattggccggtgatgatagtgaaa 403
           ||| ||||||| | ||||| ||||||||
Sbjct: 421 atttcattggctgctgatggtagtgaaa 448



 Score = 95.6 bits (48), Expect = 2e-19
 Identities = 90/104 (86%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcagagaggagcaaagagcttcttcagtttgagcacaaagacttacccttttcatcc 60
           |||||||||||||||||||||||||| ||||| |||||||| | | | ||| ||||||||
Sbjct: 34  atggcagagaggagcaaagagcttctccagttggagcacaagggcatgcccctttcatcc 93

                                                       
Query: 61  acagaatctgctcttcttgtttgtgataataaacgagaatcaaa 104
           | ||||||  ||||||||||||| |||  |||| ||||||||||
Sbjct: 94  atagaatccactcttcttgtttgcgatggtaaaagagaatcaaa 137