Miyakogusa Predicted Gene

Lj5g3v0014200.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v0014200.1 Non Chatacterized Hit- tr|B9G6H3|B9G6H3_ORYSJ
Putative uncharacterized protein OS=Oryza sativa subsp,44.44,6e-19,
,CUFF.52531.1
         (402 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC76423 similar to UniRef100_A7QT62 Cluster: Chromosome...   771   0.0  

>gnl|LJGI|TC76423 similar to UniRef100_A7QT62 Cluster: Chromosome chr1 scaffold_166,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr1 scaffold_166, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (73%)
          Length = 1083

 Score =  771 bits (389), Expect = 0.0
 Identities = 392/393 (99%)
 Strand = Plus / Plus

                                                                        
Query: 10   gcagtgcaagcttcaaggttcgaccactggatggggccaacaatcagaatgtcacttccg 69
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643  gcagtgcaagcttcaaggttcgaccactggatggggccaacaatcagaatgtcacttccg 702

                                                                        
Query: 70   agttttagtggcggtacggagtgtaatcctaacctcctcaagtattcttgcaaaattgaa 129
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 703  agttttagtggcggtacggagtgtaatcctaacctcctcaagtattcttgcaaaattgaa 762

                                                                        
Query: 130  tgcagggtgcaagcagtgcagccattgaaggtttcaagatcaatccctattacaaatgat 189
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 763  tgcagggtgcaagcagtgcagccattgaaggtttcaagatcaatccctattacaaatgat 822

                                                                        
Query: 190  gatgacaacgagaaatctttagaagactatgggagcagtagccacgaggctaaggatcat 249
            ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 823  gatgacaacgagaaatctttagaagactatgggggcagtagccacgaggctaaggatcat 882

                                                                        
Query: 250  gaaaatgatagacagaatttcagcacctgtgtgatgttatcaaaacccatcttagcattg 309
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 883  gaaaatgatagacagaatttcagcacctgtgtgatgttatcaaaacccatcttagcattg 942

                                                                        
Query: 310  aagtttaatcaaatgaagatgcaggtagaagctcccgttgtactttcccaatccttgaat 369
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 943  aagtttaatcaaatgaagatgcaggtagaagctcccgttgtactttcccaatccttgaat 1002

                                             
Query: 370  tctttagaaacttctgtcacctcggttccataa 402
            |||||||||||||||||||||||||||||||||
Sbjct: 1003 tctttagaaacttctgtcacctcggttccataa 1035