Miyakogusa Predicted Gene
- Lj5g3v0013180.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0013180.1 Non Chatacterized Hit- tr|I1M8K1|I1M8K1_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,80.26,0,alpha/beta-Hydrolases,NULL; ARM repeat,Armadillo-type
fold; RIBONUCLEASE P/MRP SUBUNIT,NULL; seg,NUL,CUFF.52528.1
(3648 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BW597231 similar to UniRef100_A7NTR5 Cluster: Chromosom... 837 0.0
gnl|LJGI|BP056667 similar to UniRef100_UPI000034F16D Cluster: bi... 357 3e-97
>gnl|LJGI|BW597231 similar to UniRef100_A7NTR5 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (9%)
Length = 485
Score = 837 bits (422), Expect = 0.0
Identities = 468/478 (97%), Gaps = 4/478 (0%)
Strand = Plus / Plus
Query: 2103 tgccttggcaaccctgaaaggtattaaggctttggctgaagttattgctgaaaactcag- 2161
||||||||| ||||||| |||| ||||||||||||||||||||||||| || ||||||
Sbjct: 9 tgccttggcgaccctgataggt-ttaaggctttggctgaagttattgcagataactcaac 67
Query: 2162 tg-tgtcaggacaaggttgttgatttt-ggcattttatgtttgctgaggcgctttttatt 2219
|| |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 68 tgctgtccggacaaggttgttgattttaggcattttatgtttgctgaggcgctttttatt 127
Query: 2220 gaatgatgattatgagaaactggctgccattgaggcttatgatgcatcatccagagcaca 2279
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 gaatgatgattatgagaaactggctgccattgaggcttatgatgcatcatccagagcaca 187
Query: 2280 tgaggggcaggagcggatgtcaaataaaggagacaaacctcctatatcagataaaaatga 2339
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 tgaggggcaggagcggatgtcaaataaaggagacaaacctcctatatcagataaaaatga 247
Query: 2340 tccagctagtgtccgagttccacccacagctcatgtccgcaggcatgcagctcggttatt 2399
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 tccagctagtgtccgagttccacccacagctcatgtccgcaggcatgcagctcggttatt 307
Query: 2400 gaccatcctctccctgcatcccaaagtcaagaaggtcgttatagctgatgaaacttggtg 2459
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gaccatcctctccctgcatcccaaagtcaagaaggtcgttatagctgatgaaacttggtg 367
Query: 2460 caattggcttgatgattgtgctaatgggaagattccaggttgcagtgaccttaaaatgca 2519
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 caattggcttgatgattgtgctaatgggaagattccaggttgcagtgaccttaaaatgca 427
Query: 2520 aagttatgccagggcaacacttttaaatatattttgtgaggaccagtttaatggaatg 2577
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 aagttatgccagggcaacacttttaaatatattttgtgaggaccagtttaatggaatg 485
>gnl|LJGI|BP056667 similar to UniRef100_UPI000034F16D Cluster: binding; n=1; Arabidopsis
thaliana|Rep: binding - Arabidopsis thaliana, partial
(4%)
Length = 509
Score = 357 bits (180), Expect = 3e-97
Identities = 180/180 (100%)
Strand = Plus / Minus
Query: 3469 ggatgggctttgcgaatggaaattgtacctattgagtcagcatatcctggatttggggaa 3528
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 ggatgggctttgcgaatggaaattgtacctattgagtcagcatatcctggatttggggaa 450
Query: 3529 cttgttgtattggagtcaacagatcatataagttcttgcaaaccagtgagccgcttagac 3588
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 cttgttgtattggagtcaacagatcatataagttcttgcaaaccagtgagccgcttagac 390
Query: 3589 ccttcttatacagagacattaaagttcttagagaaattaaaagcgtgttatacctgactg 3648
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 ccttcttatacagagacattaaagttcttagagaaattaaaagcgtgttatacctgactg 330