Miyakogusa Predicted Gene

Lj4g3v3116180.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v3116180.1 CUFF.52709.1
         (651 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC71746 homologue to UniRef100_Q2HW07 Cluster: Photosys...  1291   0.0  

>gnl|LJGI|TC71746 homologue to UniRef100_Q2HW07 Cluster: Photosystem I reaction
           centre, subunit XI PsaL; n=1; Medicago truncatula|Rep:
           Photosystem I reaction centre, subunit XI PsaL -
           Medicago truncatula (Barrel medic), complete
          Length = 1054

 Score = 1291 bits (651), Expect = 0.0
 Identities = 651/651 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggctgctgcttctccaatggctagtcagctcaagtccaccttcactaggccttctctg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60  atggctgctgcttctccaatggctagtcagctcaagtccaccttcactaggccttctctg 119

                                                                       
Query: 61  gtcacacccaagggcctctcaggctcttctccactccacctattgccttctagaagacaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 gtcacacccaagggcctctcaggctcttctccactccacctattgccttctagaagacaa 179

                                                                       
Query: 121 ttcaccttcactgtcaaggccattcaatctgagaagccaacttaccaagtgattcagcca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 ttcaccttcactgtcaaggccattcaatctgagaagccaacttaccaagtgattcagcca 239

                                                                       
Query: 181 attaatggtgacccattcattggaagccttgaaactccagttacatcaagccccttggtt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 attaatggtgacccattcattggaagccttgaaactccagttacatcaagccccttggtt 299

                                                                       
Query: 241 gcatggtacctctctaaccttccagcatacagaactgctgtgaacccactcctaagaggg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 gcatggtacctctctaaccttccagcatacagaactgctgtgaacccactcctaagaggg 359

                                                                       
Query: 301 gttgaagtgggcttggcccacgggttcctgcttgtgggcccattcgtgaaggccgggcct 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 gttgaagtgggcttggcccacgggttcctgcttgtgggcccattcgtgaaggccgggcct 419

                                                                       
Query: 361 ctgaggaacaccgaatatgcaggaagtgcaggctctcttgcagctgctggacttgtggtg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 ctgaggaacaccgaatatgcaggaagtgcaggctctcttgcagctgctggacttgtggtg 479

                                                                       
Query: 421 atccttagcctctgcctcacaatctatggaatttcatccttcaatgaaggggatccatcc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 atccttagcctctgcctcacaatctatggaatttcatccttcaatgaaggggatccatcc 539

                                                                       
Query: 481 actgcaccttcattgaccttgaccggccgcaagaaggtgcctgatcagctccaaacagca 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 actgcaccttcattgaccttgaccggccgcaagaaggtgcctgatcagctccaaacagca 599

                                                                       
Query: 541 gatggctgggccaaattcactggggggttcttctttggaggcatttctggggttacttgg 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 gatggctgggccaaattcactggggggttcttctttggaggcatttctggggttacttgg 659

                                                              
Query: 601 gcttacttcctcctctatgtcctagatcttccatactacttcaagtgaaca 651
           |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 gcttacttcctcctctatgtcctagatcttccatactacttcaagtgaaca 710