Miyakogusa Predicted Gene
- Lj4g3v3114860.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v3114860.1 tr|G7LE58|G7LE58_MEDTR Glutamyl-tRNA(Gln)
amidotransferase subunit A OS=Medicago truncatula
GN=MTR_8,82.91,0,TPR,Tetratricopeptide repeat;
TPR_REGION,Tetratricopeptide repeat-containing domain; no
description,,NODE_39232_length_2374_cov_77.149956.path2.1
(1773 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC61165 similar to UniRef100_A7PH66 Cluster: Chromosome... 1271 0.0
gnl|LJGI|BW623705 similar to UniRef100_A7PH66 Cluster: Chromosom... 906 0.0
gnl|LJGI|FS361152 similar to UniRef100_A7PH66 Cluster: Chromosom... 563 e-159
gnl|LJGI|TC70371 similar to UniRef100_A7PH66 Cluster: Chromosome... 256 4e-67
gnl|LJGI|TC61405 similar to UniRef100_A7PH66 Cluster: Chromosome... 186 3e-46
>gnl|LJGI|TC61165 similar to UniRef100_A7PH66 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (36%)
Length = 773
Score = 1271 bits (641), Expect = 0.0
Identities = 641/641 (100%)
Strand = Plus / Plus
Query: 1 atggcgtctcagtcagggaacttatgggtcttgttggggctgggcttggccggaatcttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 atggcgtctcagtcagggaacttatgggtcttgttggggctgggcttggccggaatcttc 192
Query: 61 gtcctcaccaggaagctcaaggaacacaaggaggatttaggggctttcattcaaaagctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 gtcctcaccaggaagctcaaggaacacaaggaggatttaggggctttcattcaaaagctt 252
Query: 121 cacctgcttcctcctcctcagcccgctccccctaaagctcctcaccctctcaccgctctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 cacctgcttcctcctcctcagcccgctccccctaaagctcctcaccctctcaccgctctc 312
Query: 181 accttcgctttctccgacctatttgacattcacggacatgtatccacttttggccatccc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 accttcgctttctccgacctatttgacattcacggacatgtatccacttttggccatccc 372
Query: 241 gactgggcaacctcgcaccaacctgcttcttctacttctcctgcaatctctgctcttgtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 gactgggcaacctcgcaccaacctgcttcttctacttctcctgcaatctctgctcttgtt 432
Query: 301 caagctggcgctaccgctctcggaaccactcttgttgacccctttgcatacggtattact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 caagctggcgctaccgctctcggaaccactcttgttgacccctttgcatacggtattact 492
Query: 361 ggccaaaacaagcattatggaacgcccaccaaccctgctgtgccttctcgactgcccggt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 ggccaaaacaagcattatggaacgcccaccaaccctgctgtgccttctcgactgcccggt 552
Query: 421 ggatcctctagtggtgctgctgtcgctgttgctgctaattttgttcatttctcattgggt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 ggatcctctagtggtgctgctgtcgctgttgctgctaattttgttcatttctcattgggt 612
Query: 481 attgatactactggaggggtcagactacctgctgcattttgtgccattttaggatttcga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 attgatactactggaggggtcagactacctgctgcattttgtgccattttaggatttcga 672
Query: 541 ccttcatatgctgctgtatctcatgtgggaatcatacctgtttcaacaagtttggacact 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 ccttcatatgctgctgtatctcatgtgggaatcatacctgtttcaacaagtttggacact 732
Query: 601 gtaggttggtttgccaaggatcctaatatattgcgtcgagt 641
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 gtaggttggtttgccaaggatcctaatatattgcgtcgagt 773
>gnl|LJGI|BW623705 similar to UniRef100_A7PH66 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (27%)
Length = 485
Score = 906 bits (457), Expect = 0.0
Identities = 469/473 (99%)
Strand = Plus / Plus
Query: 971 tagtaaaacctgatctccatccagctgttacagctcagttgcatggaaaattagagatat 1030
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 13 tagtaaaacctgatctccatccagctgttacttctcagttgcatggaaaattagagatat 72
Query: 1031 ccgatgcagagattgaaaattctaaatctgttagaagtgagatgcgtgctgctataaatt 1090
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 73 ccgatgcagagattgaaaattctaaatctgttaaaagtgagatgcgtgctgctataaatt 132
Query: 1091 cgcttttgaaggatgaaagaattttggtgatccctactgtagctgatcctcctccaaaat 1150
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 cgcttttgaaggatgaaagaattttggtgatccctactgtagctgatcctcctccaaaat 192
Query: 1151 taggtgggaaagagattctatcacaggattatcagagccatatgtttagtgcgctaagta 1210
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 taggtgggaaagagatcctatcacaggattatcagagccatatgtttagtgcgctaagta 252
Query: 1211 ttgctagcatatcgggttgctgtcaggtcacaatcccactgggattctacgacaagtatc 1270
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 ttgctagcatatcgggttgctgtcaggtcacaatcccactgggattctacgacaagtatc 312
Query: 1271 ctgtttcagtgtccttattagctcggcatggtggtgatcgctttttacttgacacactac 1330
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 ctgtttcagtgtccttattagctcggcatggtggtgatcgctttttacttgacacactac 372
Query: 1331 agaccatgtacacaactctccaagagcaggctgatattgcttccaaaagtaaaccatcaa 1390
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 agaccatgtacacaactctccaagagcaggctgatattgcttccaaaagtaaaccatcaa 432
Query: 1391 gcaatgttgtcagtaaggaacaatctgctgaaattgccaaagagaagggaaat 1443
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 gcaatgttgtcagtaaggaacaatctgctgaaattgccaaagagaagggaaat 485
>gnl|LJGI|FS361152 similar to UniRef100_A7PH66 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (16%)
Length = 696
Score = 563 bits (284), Expect = e-159
Identities = 284/284 (100%)
Strand = Plus / Minus
Query: 1490 cagaagctatcaaactctgtggagataatgcgacatactacaataacagggctcaagcat 1549
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 cagaagctatcaaactctgtggagataatgcgacatactacaataacagggctcaagcat 637
Query: 1550 atctagaacttggaagttacctccaagctgaggcagattctacaaaagctattaacattg 1609
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 atctagaacttggaagttacctccaagctgaggcagattctacaaaagctattaacattg 577
Query: 1610 acaagaagaatgtgaaggcgtattttcgtagaggtacagctagagagatgctaggctact 1669
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 acaagaagaatgtgaaggcgtattttcgtagaggtacagctagagagatgctaggctact 517
Query: 1670 ataaggatgcatttgatgattttacatatgctctggtacttgagccaaccaacaaaaggg 1729
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 ataaggatgcatttgatgattttacatatgctctggtacttgagccaaccaacaaaaggg 457
Query: 1730 cagctactgctgctgaaaggttgaggaagctattccagtaggta 1773
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 cagctactgctgctgaaaggttgaggaagctattccagtaggta 413
>gnl|LJGI|TC70371 similar to UniRef100_A7PH66 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (15%)
Length = 677
Score = 256 bits (129), Expect = 4e-67
Identities = 225/257 (87%)
Strand = Plus / Plus
Query: 1514 ataatgcgacatactacaataacagggctcaagcatatctagaacttggaagttacctcc 1573
||||||| ||||||||||||||||| |||||||||| ||||||||||| ||||| ||||
Sbjct: 9 ataatgcaacatactacaataacagagctcaagcattcctagaacttgggagttatctcc 68
Query: 1574 aagctgaggcagattctacaaaagctattaacattgacaagaagaatgtgaaggcgtatt 1633
|||| |||||||||| ||||| || |||| ||| ||||| ||||||||||| || ||||
Sbjct: 69 aagcagaggcagattgcacaaatgcaattagcatcgacaaaaagaatgtgaaagcctatt 128
Query: 1634 ttcgtagaggtacagctagagagatgctaggctactataaggatgcatttgatgatttta 1693
|||||||||||| ||| |||||||||||||||||||| ||||||||| ||||||||||||
Sbjct: 129 ttcgtagaggtagagcaagagagatgctaggctactacaaggatgcaattgatgatttta 188
Query: 1694 catatgctctggtacttgagccaaccaacaaaagggcagctactgctgctgaaaggttga 1753
||| || || ||||||||||| |||||||||| |||||| | | ||||||||| ||||
Sbjct: 189 aatacgcccttgtacttgagccgaccaacaaaatggcagcctcaggtgctgaaagattga 248
Query: 1754 ggaagctattccagtag 1770
|||||||||||| ||||
Sbjct: 249 ggaagctattccggtag 265
>gnl|LJGI|TC61405 similar to UniRef100_A7PH66 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (35%)
Length = 785
Score = 186 bits (94), Expect = 3e-46
Identities = 241/290 (83%)
Strand = Plus / Plus
Query: 346 gcatacggtattactggccaaaacaagcattatggaacgcccaccaaccctgctgtgcct 405
||||| ||||||| ||| |||| || || |||||||| || || || ||||||||||||
Sbjct: 496 gcatatggtattagtggtgaaaataaacagtatggaacaccaactaatcctgctgtgcct 555
Query: 406 tctcgactgcccggtggatcctctagtggtgctgctgtcgctgttgctgctaattttgtt 465
|||| | || ||||| |||||||||||||||||||| ||||||||| ||||||| |||
Sbjct: 556 gctcgggtaccgggtggctcctctagtggtgctgctgtggctgttgcttctaatttagtt 615
Query: 466 catttctcattgggtattgatactactggaggggtcagactacctgctgcattttgtgcc 525
| || || | ||||||||||| | |||||||| |||||||| || | |||||||| |
Sbjct: 616 gactttgcactaggtattgataccatcggaggggtgagactaccggccggattttgtggc 675
Query: 526 attttaggatttcgaccttcatatgctgctgtatctcatgtgggaatcatacctgtttca 585
||||| |||||||| |||||||||| ||||| |||||| | |||||||||||||||||
Sbjct: 676 attttgggatttcggccttcatatggggctgtttctcatattggaatcatacctgtttcg 735
Query: 586 acaagtttggacactgtaggttggtttgccaaggatcctaatatattgcg 635
| |||| |||| ||||| ||||||||||| | |||||||||||| |||||
Sbjct: 736 aaaagtctggagactgttggttggtttgctagggatcctaatattttgcg 785
Score = 95.6 bits (48), Expect = 9e-19
Identities = 123/148 (83%)
Strand = Plus / Plus
Query: 103 gctttcattcaaaagcttcacctgcttcctcctcctcagcccgctccccctaaagctcct 162
|||||||| || ||||||| || |||||||||||||| || ||||| || |||||||||
Sbjct: 253 gctttcatccacaagcttctgcttcttcctcctcctcaacctgctcctcccaaagctcct 312
Query: 163 caccctctcaccgctctcaccttcgctttctccgacctatttgacattcacggacatgta 222
||||||||||| | |||| |||||| |||| |||||||||||||| | ||||||||
Sbjct: 313 caccctctcacttccctcaacttcgccgtctctgacctatttgacatagatggacatgtg 372
Query: 223 tccacttttggccatcccgactgggcaa 250
|||| ||||| ||||| || |||||||
Sbjct: 373 accacgtttgggcatccagagtgggcaa 400