Miyakogusa Predicted Gene
- Lj4g3v3114100.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v3114100.2 Non Chatacterized Hit- tr|I1KQG4|I1KQG4_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,77.35,0,seg,NULL;
matE: MATE efflux family protein,Multi antimicrobial extrusion
protein; MatE,Multi antimic,CUFF.52378.2
(1497 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO013204 similar to UniRef100_A7PH11 Cluster: Chromosom... 1047 0.0
gnl|LJGI|TC68231 similar to UniRef100_A7PH11 Cluster: Chromosome... 281 6e-75
gnl|LJGI|GO036543 similar to UniRef100_A7PH11 Cluster: Chromosom... 236 3e-61
gnl|LJGI|TC69358 similar to UniRef100_A7PH11 Cluster: Chromosome... 228 8e-59
gnl|LJGI|BP069580 similar to UniRef100_A7PH11 Cluster: Chromosom... 186 3e-46
gnl|LJGI|BP059180 similar to UniRef100_A7PH11 Cluster: Chromosom... 66 7e-10
>gnl|LJGI|GO013204 similar to UniRef100_A7PH11 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (35%)
Length = 528
Score = 1047 bits (528), Expect = 0.0
Identities = 528/528 (100%)
Strand = Plus / Plus
Query: 140 agaagcagttatggctggcagggcctttggtatcagcaggtctgctgaacttttgcatac 199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agaagcagttatggctggcagggcctttggtatcagcaggtctgctgaacttttgcatac 60
Query: 200 agatcatatctgttatgtttgtgggccatctaggtgagctgcctctggctggtgcttcaa 259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agatcatatctgttatgtttgtgggccatctaggtgagctgcctctggctggtgcttcaa 120
Query: 260 tggccacttcttttgcttctgtcactggtattagcttgttgctgggaatggccagtgcct 319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tggccacttcttttgcttctgtcactggtattagcttgttgctgggaatggccagtgcct 180
Query: 320 tggataccttttgtgggcagtcatatggagcaaagcagcacagaatgttaggcatacaca 379
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tggataccttttgtgggcagtcatatggagcaaagcagcacagaatgttaggcatacaca 240
Query: 380 tgcaaagggccatgctcactcttgtgattgtcagcatacccttagcaatcatttgggcaa 439
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgcaaagggccatgctcactcttgtgattgtcagcatacccttagcaatcatttgggcaa 300
Query: 440 acacaaggtccattctggttttctttggccaagatcctgaaatatctgcagaagcaggga 499
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 acacaaggtccattctggttttctttggccaagatcctgaaatatctgcagaagcaggga 360
Query: 500 aatatgctcagttaatggttccaagcctttttgcctatggtcttcttcaatgtctaaaca 559
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aatatgctcagttaatggttccaagcctttttgcctatggtcttcttcaatgtctaaaca 420
Query: 560 gattcttacaaacacaaaatattgtattgccaactatgttcagctctggagttactactt 619
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gattcttacaaacacaaaatattgtattgccaactatgttcagctctggagttactactt 480
Query: 620 tgctacatcttgttgtgtgttggattttggtattcaaatgcggtttag 667
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tgctacatcttgttgtgtgttggattttggtattcaaatgcggtttag 528
>gnl|LJGI|TC68231 similar to UniRef100_A7PH11 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (23%)
Length = 895
Score = 281 bits (142), Expect = 6e-75
Identities = 271/314 (86%)
Strand = Plus / Plus
Query: 1132 tatagtaatgaagcagaagtggtcgaatatgtagcaatcatgttgccaattcttgcagta 1191
||||||||||||| |||||||||| |||||||||||| ||||||||||||||||||| |
Sbjct: 4 tatagtaatgaagaagaagtggtcaaatatgtagcaactatgttgccaattcttgcagca 63
Query: 1192 tccaacttcttggatggatttcagtgtgtactttcaggcacagttagaggatgtggtcgg 1251
|||||||| |||||||| | || | ||| |||||||||| | ||||||||| ||| ||
Sbjct: 64 tccaactttctggatggaatccaatctgttctttcaggcaatgctagaggatgcggttgg 123
Query: 1252 cagaaaattggtgcattcatcaatttaggctcttattatctagttgggattccatcagct 1311
||||||||||||||||| | ||| | || || || ||| ||||||| |||||| |||||
Sbjct: 124 cagaaaattggtgcatttgtgaatctggggtcgtactatatagttggaattccagcagct 183
Query: 1312 atcctgctagcttttgtattgaatattggagggaaggggctctggctggggatcatttgt 1371
||| || |||||||||||||| ||||||||||||||||||| |||||||| ||||| |||
Sbjct: 184 atcgtgttagcttttgtattggatattggagggaaggggctgtggctgggaatcatatgt 243
Query: 1372 gcactcattgttcaagtattatctctattgatcatcaccttacgtactgattgggagcaa 1431
|||||||||||||||||||| || ||| |||| || || |||| |||||||||||| ||
Sbjct: 244 gcactcattgttcaagtattttccctaatgattattactatacgaactgattgggagaaa 303
Query: 1432 gaggcaaagaaggc 1445
||||||||||||||
Sbjct: 304 gaggcaaagaaggc 317
>gnl|LJGI|GO036543 similar to UniRef100_A7PH11 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (32%)
Length = 782
Score = 236 bits (119), Expect = 3e-61
Identities = 279/331 (84%), Gaps = 1/331 (0%)
Strand = Plus / Plus
Query: 1115 atatttgggcctacgcctatagtaatgaagcagaagtggtcgaatatgtagcaatcatgt 1174
||||||||| || || ||||||||||||| |||||||||| ||||||| |||| |||
Sbjct: 126 atatttggggttatgcttatagtaatgaagaagaagtggtcaaatatgttgcaactatga 185
Query: 1175 tgccaattcttgcagtatccaacttcttggatggatttcagtgtgtactttcaggcacag 1234
||||||||||||||| ||||||||| |||| ||| | || | ||| |||||||||| |
Sbjct: 186 tgccaattcttgcagcatccaactttctggacggaatccaatctgttctttcaggcaatg 245
Query: 1235 ttagaggatgtggtcggcagaaaattggtgcattcatcaatttaggctcttattatctag 1294
||||||||| ||| ||||||||||||||||||| | ||| | || || || ||| |||
Sbjct: 246 ctagaggatgcggttggcagaaaattggtgcatttgtgaatctggggtcgtactatatag 305
Query: 1295 ttgggattccatcagctatcctgctagcttttgtattgaatattggagggaaggggctct 1354
|||| |||||| |||||||| || |||||||||||||| ||||||||||||| ||||| |
Sbjct: 306 ttggaattccagcagctatcgtgttagcttttgtattggatattggagggaa-gggctgt 364
Query: 1355 ggctggggatcatttgtgcactcattgttcaagtattatctctattgatcatcaccttac 1414
||||||| ||||| ||||||||||||||||||||||| || ||| |||| || || ||
Sbjct: 365 ggctgggaatcatatgtgcactcattgttcaagtattttccctaatgattattactatat 424
Query: 1415 gtactgattgggagcaagaggcaaagaaggc 1445
| |||||||||||| ||||||||||||||||
Sbjct: 425 ggactgattgggagaaagaggcaaagaaggc 455
>gnl|LJGI|TC69358 similar to UniRef100_A7PH11 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (30%)
Length = 795
Score = 228 bits (115), Expect = 8e-59
Identities = 301/363 (82%)
Strand = Plus / Plus
Query: 208 tctgttatgtttgtgggccatctaggtgagctgcctctggctggtgcttcaatggccact 267
||||| |||||||| || ||||| || ||| || |||| |||||||||| ||||| |||
Sbjct: 431 tctgtcatgtttgttggtcatcttggcgagttggctctctctggtgcttccatggctact 490
Query: 268 tcttttgcttctgtcactggtattagcttgttgctgggaatggccagtgccttggatacc 327
|||||||| |||||||| ||| | || || ||| | |||||||| |||||||| ||||||
Sbjct: 491 tcttttgcatctgtcacgggtttcagtttattggtaggaatggcaagtgccttagatacc 550
Query: 328 ttttgtgggcagtcatatggagcaaagcagcacagaatgttaggcatacacatgcaaagg 387
|| ||||| || |||||||| ||||||||| || | |||||||||| |||||||| |||
Sbjct: 551 ttatgtggtcaatcatatggggcaaagcagtaccgcttgttaggcattcacatgcagagg 610
Query: 388 gccatgctcactcttgtgattgtcagcatacccttagcaatcatttgggcaaacacaagg 447
|| ||| | | |||| || |||||||||| || | || || ||||||||||||||| |
Sbjct: 611 gctatgttgattcttatggttgtcagcattccgcttgcgattatttgggcaaacacagga 670
Query: 448 tccattctggttttctttggccaagatcctgaaatatctgcagaagcagggaaatatgct 507
||||| || ||||| |||||||||||||||| |||||||||| ||| ||| ||||||||
Sbjct: 671 tccatcctcattttccttggccaagatcctgagatatctgcagcagctggggaatatgct 730
Query: 508 cagttaatggttccaagcctttttgcctatggtcttcttcaatgtctaaacagattctta 567
|| ||||||||||| ||||||||| ||||||||||| ||||| || || |||||||||
Sbjct: 731 aagataatggttccatgcctttttggttatggtcttctgcaatgcctcaatagattctta 790
Query: 568 caa 570
|||
Sbjct: 791 caa 793
>gnl|LJGI|BP069580 similar to UniRef100_A7PH11 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (17%)
Length = 483
Score = 186 bits (94), Expect = 3e-46
Identities = 175/202 (86%)
Strand = Plus / Minus
Query: 1237 agaggatgtggtcggcagaaaattggtgcattcatcaatttaggctcttattatctagtt 1296
|||||||||||| |||||||||||||||||| || ||| | || || || ||| |||||
Sbjct: 252 agaggatgtggtttgcagaaaattggtgcatttattaatctggggtcatactatttagtt 193
Query: 1297 gggattccatcagctatcctgctagcttttgtattgaatattggagggaaggggctctgg 1356
|| ||||| | |||||| | |||||||||||||| ||||||||||||||||||| |||
Sbjct: 192 ggaattccgttagctatggtcttagcttttgtattgcatattggagggaaggggctgtgg 133
Query: 1357 ctggggatcatttgtgcactcattgttcaagtattatctctattgatcatcaccttacgt 1416
||||||||||| ||||||||||||||||||||||| |||||| ||||||| || || |||
Sbjct: 132 ctggggatcatatgtgcactcattgttcaagtattttctctaatgatcattactttgcgt 73
Query: 1417 actgattgggagcaagaggcaa 1438
| |||||||||| |||||||||
Sbjct: 72 attgattgggagaaagaggcaa 51
>gnl|LJGI|BP059180 similar to UniRef100_A7PH11 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (7%)
Length = 133
Score = 65.9 bits (33), Expect = 7e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 111 agaaagaagagatgtttttgaagaagttaagaagcagttatggctggcagggccttt 167
|||||||| ||| ||| |||||||||| | ||||||||||||||||||||| |||||
Sbjct: 15 agaaagaacagaagttcttgaagaagtgaggaagcagttatggctggcaggaccttt 71