Miyakogusa Predicted Gene
- Lj4g3v3114000.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v3114000.2 tr|G7LCF5|G7LCF5_MEDTR Poly(A) polymerase
OS=Medicago truncatula GN=MTR_8g106560 PE=4 SV=1,69.35,0,no
description,NULL; no description,Poly(A) polymerase, RNA-binding
domain; seg,NULL; PAP_central,Po,CUFF.52377.2
(1887 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS322881 similar to UniRef100_A7PGZ4 Cluster: Chromosom... 973 0.0
gnl|LJGI|TC65186 914 0.0
gnl|LJGI|GO020094 similar to UniRef100_A7P3F5 Cluster: Chromosom... 547 e-155
gnl|LJGI|TC65946 similar to UniRef100_A7PGZ3 Cluster: Chromosome... 84 4e-15
>gnl|LJGI|FS322881 similar to UniRef100_A7PGZ4 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (19%)
Length = 688
Score = 973 bits (491), Expect = 0.0
Identities = 491/491 (100%)
Strand = Plus / Plus
Query: 806 agattgagaagcacacttacggcatgcttcaaagtcatccacatcctggtgaattttctg 865
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 agattgagaagcacacttacggcatgcttcaaagtcatccacatcctggtgaattttctg 257
Query: 866 ataaatctagacctttacactgctcttacttcatgggtctgcaacgtaagcagggagttc 925
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 ataaatctagacctttacactgctcttacttcatgggtctgcaacgtaagcagggagttc 317
Query: 926 cagtcaatgatggtgaacaatttgatataagattaactgttgaagaatttaagcaaacag 985
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 cagtcaatgatggtgaacaatttgatataagattaactgttgaagaatttaagcaaacag 377
Query: 986 tcaacatgtacatgctatggaaacctggaatggatatccacatctcccatgtaaaacgcc 1045
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 tcaacatgtacatgctatggaaacctggaatggatatccacatctcccatgtaaaacgcc 437
Query: 1046 gtaatatacctaactttgtatttcctggaggtgttcgaccttcccgcccagctaaaataa 1105
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 gtaatatacctaactttgtatttcctggaggtgttcgaccttcccgcccagctaaaataa 497
Query: 1106 cctgggagagtaagcgaaattcagaattaatgatatctggcaatggtcaagcagaaaagt 1165
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 cctgggagagtaagcgaaattcagaattaatgatatctggcaatggtcaagcagaaaagt 557
Query: 1166 ctgaagaagataaagtggttgtcttaggagaaaatgatgataggaagagaaagcaagcag 1225
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 ctgaagaagataaagtggttgtcttaggagaaaatgatgataggaagagaaagcaagcag 617
Query: 1226 aggatagcctggatgacttgagaaattccaagtcctttgcatctttgcctccctccagca 1285
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 aggatagcctggatgacttgagaaattccaagtcctttgcatctttgcctccctccagca 677
Query: 1286 gggaagttgat 1296
|||||||||||
Sbjct: 678 gggaagttgat 688
>gnl|LJGI|TC65186
Length = 728
Score = 914 bits (461), Expect = 0.0
Identities = 464/465 (99%)
Strand = Plus / Plus
Query: 1423 agggatagagagaccaccggatcagtgagaaacaactcaaatgtcaatcctatgcctata 1482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agggatagagagaccaccggatcagtgagaaacaactcaaatgtcaatcctatgcctata 60
Query: 1483 atttttgctaccgatacatctagttctaaagaagcagaaaagctggccatcgaaaagatt 1542
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 61 atttttgctaccgatacatctagttttaaagaagcagaaaagctggccatcgaaaagatt 120
Query: 1543 atgcctggtccatatgatgcgcatcaagcctttccaaaagaacctgatgagcttgaaaat 1602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atgcctggtccatatgatgcgcatcaagcctttccaaaagaacctgatgagcttgaaaat 180
Query: 1603 gatattgaggataaaaatcgagtcaaggattttggtatgaacacgcaaaccagaaacttg 1662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gatattgaggataaaaatcgagtcaaggattttggtatgaacacgcaaaccagaaacttg 240
Query: 1663 gactcttcaaactcaagctcatgtgtggcagaagaaccagttgtttctaaaacggaaacc 1722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gactcttcaaactcaagctcatgtgtggcagaagaaccagttgtttctaaaacggaaacc 300
Query: 1723 acttgttcaactaatctatactctagtggggtcttggaggagcttgagcctgctgagctg 1782
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 acttgttcaactaatctatactctagtggggtcttggaggagcttgagcctgctgagctg 360
Query: 1783 accgcgccattgttaagtgggactcctgcaccagtgccagagcggaagccccttatcaga 1842
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 accgcgccattgttaagtgggactcctgcaccagtgccagagcggaagccccttatcaga 420
Query: 1843 ttcaatttcacatccttggggaaagctgctgacaaaagttgttag 1887
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ttcaatttcacatccttggggaaagctgctgacaaaagttgttag 465
>gnl|LJGI|GO020094 similar to UniRef100_A7P3F5 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (58%)
Length = 708
Score = 547 bits (276), Expect = e-155
Identities = 435/488 (89%)
Strand = Plus / Plus
Query: 18 ggaagtaacagagttgcaccctgtgcctgatgctcatgttccggtgatgaggttcaagtt 77
|||||||||||| || ||||||||||||||||| ||||| || ||||||| ||||| ||
Sbjct: 214 ggaagtaacagaatttcaccctgtgcctgatgcacatgtccctgtgatgaaattcaaatt 273
Query: 78 caatggtgtttctatagatctcctttatgcaagattatctttgtgggttattcctgaaga 137
|||||| |||||| |||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 274 caatggagtttctgtagatctcctttatgcaagattgtcattgtgggttattcctgaaga 333
Query: 138 cttggatatatcccaggagtcagtattacaacatgcggatgaacaaactgttcgtagtct 197
||| |||||||| ||||| |||||||||||| ||| |||||||||||||||| |||||
Sbjct: 334 cttagatatatcacaggaatcagtattacaaaatgtagatgaacaaactgttctcagtct 393
Query: 198 taatggttgtagagtgactgatcaaatcttacgtttggttccaaatattcagaactttcg 257
||||||||| ||||| ||||||||| || | ||| | || |||||||||||||| |||||
Sbjct: 394 taatggttgcagagtaactgatcaagtcctgcgtctagtcccaaatattcagaattttcg 453
Query: 258 aatgacattgagatgcatgaagctatgggcaaagcgtcgtggtgtttattcaaatgttac 317
| |||||||||||||||| | ||||||||||||||||||||||||||||||||| |
Sbjct: 454 cacaacattgagatgcatgagattttgggcaaagcgtcgtggtgtttattcaaatgttgc 513
Query: 318 aggttttcttggtggtataaactgggcattgcttgtagctcgaatatgccagctatttcc 377
||||||||||||||||||||| |||||||||||| ||||||||||||||||||| |||
Sbjct: 514 gggttttcttggtggtataaacctggcattgcttgttgctcgaatatgccagctatatcc 573
Query: 378 taatgcactgcctaatatgttagtgtctcggttctttagggtatatactcagtggcgttg 437
||| |||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||
Sbjct: 574 taacgcactgcctaatatgttagtgtctcgattctttagggtatatactcaatggcgatg 633
Query: 438 gccaaacccagtaatgctttgtcctattgaagaaggatctcttggacttcaagtttggga 497
|||||||||||| ||||||||| |||||||||| ||||||||||||| || |||||||
Sbjct: 634 gccaaacccagtcatgctttgtggtattgaagaaagatctcttggactacagatttggga 693
Query: 498 tcctagaa 505
||||||||
Sbjct: 694 tcctagaa 701
>gnl|LJGI|TC65946 similar to UniRef100_A7PGZ3 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (25%)
Length = 842
Score = 83.8 bits (42), Expect = 4e-15
Identities = 98/116 (84%), Gaps = 3/116 (2%)
Strand = Plus / Plus
Query: 1687 gtggcagaagaaccagttgtttctaaaacggaaaccacttgttcaactaatctatactct 1746
||||||||||| |||||| ||||||| || |||||| |||||| || |||||| ||||
Sbjct: 438 gtggcagaagagccagttatttctaa---gggaaccacatgttcaccttatctatgctct 494
Query: 1747 agtggggtcttggaggagcttgagcctgctgagctgaccgcgccattgttaagtgg 1802
| ||||| | |||||||||||||||| |||||| || | || ||||||||||||||
Sbjct: 495 aatgggggcctggaggagcttgagccagctgagttgtcagcaccattgttaagtgg 550