Miyakogusa Predicted Gene
- Lj4g3v3113910.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v3113910.1 Non Chatacterized Hit- tr|I1KQF3|I1KQF3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.5204
PE=,64.32,0,RING/U-box,NULL; ZF_RING_2,Zinc finger, RING-type; Ring
finger,Zinc finger, RING-type; no descriptio,CUFF.52365.1
(1053 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58626 similar to UniRef100_A7PGY6 Cluster: Chromosome... 1425 0.0
gnl|LJGI|TC73857 similar to UniRef100_A7PGY6 Cluster: Chromosome... 1164 0.0
gnl|LJGI|BP065151 weakly similar to UniRef100_A7PGY6 Cluster: Ch... 280 2e-74
gnl|LJGI|TC71291 similar to UniRef100_A7PGY6 Cluster: Chromosome... 92 8e-18
gnl|LJGI|TC69307 weakly similar to UniRef100_A7PGY6 Cluster: Chr... 86 5e-16
>gnl|LJGI|TC58626 similar to UniRef100_A7PGY6 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (34%)
Length = 1304
Score = 1425 bits (719), Expect = 0.0
Identities = 719/719 (100%)
Strand = Plus / Plus
Query: 335 ccgcggattggcaagggaagaaaggcagaaagaagaagcacaagaggaacagcagcaaca 394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 ccgcggattggcaagggaagaaaggcagaaagaagaagcacaagaggaacagcagcaaca 354
Query: 395 agaattgccatggtgggatggtagatggttcttctgctacttgtgtggattttcaagatg 454
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 agaattgccatggtgggatggtagatggttcttctgctacttgtgtggattttcaagatg 414
Query: 455 tttggtgtggtcctggaattggattctcaggggatgctgttgctgcctctgttgattgtg 514
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 tttggtgtggtcctggaattggattctcaggggatgctgttgctgcctctgttgattgtg 474
Query: 515 ttgtgtctagaaagaatgtctctgcaagggggaagattgatgtggagaagatagcacaga 574
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 ttgtgtctagaaagaatgtctctgcaagggggaagattgatgtggagaagatagcacaga 534
Query: 575 gagagcgttcatattcttgtcgacattctgtcgtcaccttcccggacagtgctgatgaaa 634
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 gagagcgttcatattcttgtcgacattctgtcgtcaccttcccggacagtgctgatgaaa 594
Query: 635 acgttttcacgccaccctttgaagaacctgaaacatactatgtaagagattctgagatta 694
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 acgttttcacgccaccctttgaagaacctgaaacatactatgtaagagattctgagatta 654
Query: 695 taatgcttcaaggaagtatagtacgattaaattcacaagaccgtcatagagacttgagac 754
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 taatgcttcaaggaagtatagtacgattaaattcacaagaccgtcatagagacttgagac 714
Query: 755 ttgatgttgacaacatgtcgtatgagcaattacttgagctcagtgagaggattgggtatg 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 ttgatgttgacaacatgtcgtatgagcaattacttgagctcagtgagaggattgggtatg 774
Query: 815 tcagcaccggactgaaagaagaagagatgcggaagaacataaggaagcttcagatttcgg 874
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 tcagcaccggactgaaagaagaagagatgcggaagaacataaggaagcttcagatttcgg 834
Query: 875 atgatgcgtctcaagtagacaaaaattgcaccatttgtcaggaagagtatgaagtagaag 934
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 835 atgatgcgtctcaagtagacaaaaattgcaccatttgtcaggaagagtatgaagtagaag 894
Query: 935 aggaaattgggagacttaactgtggtcacagctatcactatcagtgcatacagcaatggg 994
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 895 aggaaattgggagacttaactgtggtcacagctatcactatcagtgcatacagcaatggg 954
Query: 995 ttgaacagaaaaatttctgtccggtctgcaaacgactagttgctgctaggcactagttg 1053
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 955 ttgaacagaaaaatttctgtccggtctgcaaacgactagttgctgctaggcactagttg 1013
Score = 458 bits (231), Expect = e-128
Identities = 265/282 (93%)
Strand = Plus / Plus
Query: 1 atgccttttgtgacaacagagacaacaaaaacagtagcagaacacatcaaatggagaaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14 atgccttttgtgacaacagagacaacaaaaacagtagcagaacacatcaaatggagaaga 73
Query: 61 cccagagaccaattcaggnnnnnnnnnnnnnnnnnccaccaccccatttcagaaacagat 120
|||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 74 cccagagaccaattcaggcatcatcatcatcatcaccaccaccccatttcagaaacagat 133
Query: 121 ccaaacccacaaatccaatccactcgctgcaagtccaccatttccgctctgctcctctcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 ccaaacccacaaatccaatccactcgctgcaagtccaccatttccgctctgctcctctcc 193
Query: 181 actttctccaatgaaaccaccaccaccaccccacaagctgccaccagtgcccggagcagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 actttctccaatgaaaccaccaccaccaccccacaagctgccaccagtgcccggagcagg 253
Query: 241 aagaagagcaacttttctgcagcagccttcagagggttgggc 282
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 aagaagagcaacttttctgcagcagccttcagagggttgggc 295
>gnl|LJGI|TC73857 similar to UniRef100_A7PGY6 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (29%)
Length = 773
Score = 1164 bits (587), Expect = 0.0
Identities = 621/638 (97%)
Strand = Plus / Plus
Query: 1 atgccttttgtgacaacagagacaacaaaaacagtagcagaacacatcaaatggagaaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136 atgccttttgtgacaacagagacaacaaaaacagtagcagaacacatcaaatggagaaga 195
Query: 61 cccagagaccaattcaggnnnnnnnnnnnnnnnnnccaccaccccatttcagaaacagat 120
|||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 196 cccagagaccaattcaggcatcatcatcatcatcaccaccaccccatttcagaaacagat 255
Query: 121 ccaaacccacaaatccaatccactcgctgcaagtccaccatttccgctctgctcctctcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 ccaaacccacaaatccaatccactcgctgcaagtccaccatttccgctctgctcctctcc 315
Query: 181 actttctccaatgaaaccaccaccaccaccccacaagctgccaccagtgcccggagcagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 actttctccaatgaaaccaccaccaccaccccacaagctgccaccagtgcccggagcagg 375
Query: 241 aagaagagcaacttttctgcagcagccttcagagggttgggctgcaccgctggcgcgtcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 aagaagagcaacttttctgcagcagccttcagagggttgggctgcaccgctggcgcgtcc 435
Query: 301 cagcaggtgtcggtgccggcggcgattcgcgcctccgcggattggcaagggaagaaaggc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 cagcaggtgtcggtgccggcggcgattcgcgcctccgcggattggcaagggaagaaaggc 495
Query: 361 agaaagaagaagcacaagaggaacagcagcaacaagaattgccatggtgggatggtagat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 agaaagaagaagcacaagaggaacagcagcaacaagaattgccatggtgggatggtagat 555
Query: 421 ggttcttctgctacttgtgtggattttcaagatgtttggtgtggtcctggaattggattc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 ggttcttctgctacttgtgtggattttcaagatgtttggtgtggtcctggaattggattc 615
Query: 481 tcaggggatgctgttgctgcctctgttgattgtgttgtgtctagaaagaatgtctctgca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 tcaggggatgctgttgctgcctctgttgattgtgttgtgtctagaaagaatgtctctgca 675
Query: 541 agggggaagattgatgtggagaagatagcacagagagagcgttcatattcttgtcgacat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 agggggaagattgatgtggagaagatagcacagagagagcgttcatattcttgtcgacat 735
Query: 601 tctgtcgtcaccttcccggacagtgctgatgaaaacgt 638
||||||||||||||||||||||||||||||||||||||
Sbjct: 736 tctgtcgtcaccttcccggacagtgctgatgaaaacgt 773
>gnl|LJGI|BP065151 weakly similar to UniRef100_A7PGY6 Cluster: Chromosome chr17
scaffold_16, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr17 scaffold_16, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (16%)
Length = 493
Score = 280 bits (141), Expect = 2e-74
Identities = 141/141 (100%)
Strand = Plus / Minus
Query: 913 caggaagagtatgaagtagaagaggaaattgggagacttaactgtggtcacagctatcac 972
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 caggaagagtatgaagtagaagaggaaattgggagacttaactgtggtcacagctatcac 179
Query: 973 tatcagtgcatacagcaatgggttgaacagaaaaatttctgtccggtctgcaaacgacta 1032
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178 tatcagtgcatacagcaatgggttgaacagaaaaatttctgtccggtctgcaaacgacta 119
Query: 1033 gttgctgctaggcactagttg 1053
|||||||||||||||||||||
Sbjct: 118 gttgctgctaggcactagttg 98
Score = 228 bits (115), Expect = 6e-59
Identities = 118/119 (99%)
Strand = Plus / Minus
Query: 798 tgagaggattgggtatgtcagcaccggactgaaagaagaagagatgcggaagaacataag 857
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 tgagaggattgggtatgtcagcaccggactgaaagaagaagagatgcggaagaacataag 434
Query: 858 gaagcttcagatttcggatgatgcgtctcaagtagacaaaaattgcaccatttgtcagg 916
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 433 gaagcttcagatttcggatgatgcgtctcaagtagacgaaaattgcaccatttgtcagg 375
>gnl|LJGI|TC71291 similar to UniRef100_A7PGY6 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (14%)
Length = 751
Score = 91.7 bits (46), Expect = 8e-18
Identities = 82/94 (87%)
Strand = Plus / Plus
Query: 256 tctgcagcagccttcagagggttgggctgcaccgctggcgcgtcccagcaggtgtcggtg 315
||||||| | ||||||||||| | || |||||||| || |||||||||||||||||||||
Sbjct: 537 tctgcaggaaccttcagagggctcggttgcaccgccggtgcgtcccagcaggtgtcggtg 596
Query: 316 ccggcggcgattcgcgcctccgcggattggcaag 349
||||||| |||||| ||||||| || |||||||
Sbjct: 597 ccggcggtgattcgatcctccgcagactggcaag 630
Score = 60.0 bits (30), Expect = 3e-08
Identities = 50/56 (89%), Gaps = 3/56 (5%)
Strand = Plus / Plus
Query: 135 ccaatccactcgctgcaagtccaccatttccgctctgctcctctccactttctcca 190
|||||||||||||||||| |||||||||||| || |||||||| ||||||||||
Sbjct: 398 ccaatccactcgctgcaaatccaccatttcctct---ctcctctcaactttctcca 450
Score = 52.0 bits (26), Expect = 7e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 41 aacacatcaaatggagaagacccaga 66
||||||||||||||||||||||||||
Sbjct: 313 aacacatcaaatggagaagacccaga 338
>gnl|LJGI|TC69307 weakly similar to UniRef100_A7PGY6 Cluster: Chromosome chr17
scaffold_16, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr17 scaffold_16, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (29%)
Length = 788
Score = 85.7 bits (43), Expect = 5e-16
Identities = 88/103 (85%)
Strand = Plus / Plus
Query: 741 tagagacttgagacttgatgttgacaacatgtcgtatgagcaattacttgagctcagtga 800
|||||||| |||||||||| |||| |||||||| ||||||||||| |||||||| ||||
Sbjct: 240 tagagactggagacttgatattgataacatgtcctatgagcaattgcttgagctgggtga 299
Query: 801 gaggattgggtatgtcagcaccggactgaaagaagaagagatg 843
|| ||||||||||| | ||| ||| | |||||||| ||||||
Sbjct: 300 gaaaattgggtatgtgaacacgggagttaaagaagatgagatg 342
Score = 52.0 bits (26), Expect = 7e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 885 tcaagtagacaaaaattgcaccatttgtcaggaagagtatga 926
|||| |||||| ||| ||||||||||||||||| ||||||||
Sbjct: 396 tcaactagacagaaagtgcaccatttgtcaggaggagtatga 437