Miyakogusa Predicted Gene
- Lj4g3v3113810.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v3113810.1 Non Chatacterized Hit- tr|I1KQE8|I1KQE8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.8146
PE=,93.44,0,PC_rep,Proteasome/cyclosome, regulatory subunit;
HEAT_2,NULL; seg,NULL; no description,Armadillo-lik,CUFF.52592.1
(3015 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC75855 similar to UniRef100_A7Q7J2 Cluster: Chromosome... 1972 0.0
gnl|LJGI|TC76530 homologue to UniRef100_Q6XJG7 Cluster: 26S prot... 1645 0.0
gnl|LJGI|BP042902 homologue to UniRef100_Q6XJG7 Cluster: 26S pro... 906 0.0
gnl|LJGI|TC68408 similar to UniRef100_A7QXR1 Cluster: Chromosome... 533 e-150
gnl|LJGI|TC67453 similar to UniRef100_A7QXR1 Cluster: Chromosome... 377 e-103
gnl|LJGI|AV775984 similar to UniRef100_Q9AVR9 Cluster: Choline k... 54 5e-06
>gnl|LJGI|TC75855 similar to UniRef100_A7Q7J2 Cluster: Chromosome undetermined
scaffold_60, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_60, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(27%)
Length = 1102
Score = 1972 bits (995), Expect = 0.0
Identities = 995/995 (100%)
Strand = Plus / Plus
Query: 1 atggccacgacgctcgtgagctccgccggtgggatgctggcgatgctgaacgagtcccat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108 atggccacgacgctcgtgagctccgccggtgggatgctggcgatgctgaacgagtcccat 167
Query: 61 ctatcgctcaagcttcacgctctctccaacctcaacaatctcgtcgacactttctggccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 168 ctatcgctcaagcttcacgctctctccaacctcaacaatctcgtcgacactttctggccc 227
Query: 121 gagatctccaccagtgtccccctcatagagagtttgtatgaagatgaggagtttgatcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228 gagatctccaccagtgtccccctcatagagagtttgtatgaagatgaggagtttgatcag 287
Query: 181 catcaaaggcaacttgctgcgcttgtcgtatctaaggtcttctattacttgggcgaactt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 catcaaaggcaacttgctgcgcttgtcgtatctaaggtcttctattacttgggcgaactt 347
Query: 241 gatgattcattatcttatgcccttggagctggtcctctttttgatgtttctgaggattct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 gatgattcattatcttatgcccttggagctggtcctctttttgatgtttctgaggattct 407
Query: 301 gactatgtgcacactcttcttgttaaagccatagatgaatatgctagtctcaagtctaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 gactatgtgcacactcttcttgttaaagccatagatgaatatgctagtctcaagtctaag 467
Query: 361 gcagcagaatcaggtgatacatctatcaaatcggatccaaggttggaggcgattgtggag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 gcagcagaatcaggtgatacatctatcaaatcggatccaaggttggaggcgattgtggag 527
Query: 421 agaatgtttgataagtgtatcatggatggaaagtaccaacaggccatgggaactgccatt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 agaatgtttgataagtgtatcatggatggaaagtaccaacaggccatgggaactgccatt 587
Query: 481 gagtgcaggaggttggataaactagaggaagcaattacaaagagtgacaacgttcaagga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 gagtgcaggaggttggataaactagaggaagcaattacaaagagtgacaacgttcaagga 647
Query: 541 actctatcatattgcattaatgtctctcattcctttgtgaatcttagagaatacagacag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 648 actctatcatattgcattaatgtctctcattcctttgtgaatcttagagaatacagacag 707
Query: 601 gaggttctccgtctccttgttaaagtatttcaaaagctttcttcaccggattatctgagc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 708 gaggttctccgtctccttgttaaagtatttcaaaagctttcttcaccggattatctgagc 767
Query: 661 atttgtcaatgtctcatgttcttggatgagccagagggtgttgcaagcatattagaaaga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 768 atttgtcaatgtctcatgttcttggatgagccagagggtgttgcaagcatattagaaaga 827
Query: 721 cttttacgttctgaaaacaaatatgatgctctattggcatttcaaatagcttttgatttg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 828 cttttacgttctgaaaacaaatatgatgctctattggcatttcaaatagcttttgatttg 887
Query: 781 gtagagaatgagcaccaagcttttcttctaagtgtcagggatcgtcttgcatcaccgaag 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 888 gtagagaatgagcaccaagcttttcttctaagtgtcagggatcgtcttgcatcaccgaag 947
Query: 841 ttaccttcagaatctgcacagccaaaacccagtgatacaggttctactcccagtgctagt 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 948 ttaccttcagaatctgcacagccaaaacccagtgatacaggttctactcccagtgctagt 1007
Query: 901 gcgaatgcaccagatgatgttcagatggaagatggtgattcagcttctattgtcaatgtg 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1008 gcgaatgcaccagatgatgttcagatggaagatggtgattcagcttctattgtcaatgtg 1067
Query: 961 cctgaggatccaagtgaaaaaatgtatgctgagag 995
|||||||||||||||||||||||||||||||||||
Sbjct: 1068 cctgaggatccaagtgaaaaaatgtatgctgagag 1102
>gnl|LJGI|TC76530 homologue to UniRef100_Q6XJG7 Cluster: 26S proteasome subunit RPN2a;
n=1; Arabidopsis thaliana|Rep: 26S proteasome subunit
RPN2a - Arabidopsis thaliana (Mouse-ear cress), partial
(28%)
Length = 839
Score = 1645 bits (830), Expect = 0.0
Identities = 836/838 (99%)
Strand = Plus / Plus
Query: 1587 cagtatgggcctactcatggttggaacaggcagtgaaaaggcaaatgagatgcttactta 1646
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 cagtatgggcctactcatggttggaacaggcagtgaaaaggcaaatgagatgcttactta 61
Query: 1647 tgcacatgagacacagcatgaaaaaattatcagagggttagcattgggaatagctcttac 1706
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 tgcacatgagacacagcatgaaaaaattatcagagggttagcattgggaatagctcttat 121
Query: 1707 ggtttatggcagagaagaaggagctgacacattgattgagcagatgactcgcgatcagga 1766
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 ggtttatggcagagaagaaggagctgacacattgattgagcagatgactcgcgatcagga 181
Query: 1767 tccaatattgcgttatggtgggatgtacgcattggccttggcatatagcggaacggcaaa 1826
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 tccaatattgcgttatggcgggatgtacgcattggccttggcatatagcggaacggcaaa 241
Query: 1827 taataaggccattcgccagttactgcactttgctgtgtctgatgtgagtgatgatgtcag 1886
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 taataaggccattcgccagttactgcactttgctgtgtctgatgtgagtgatgatgtcag 301
Query: 1887 gaggaccgctgttctagcattggggtttgtgttgtactctgatccagaacagactccacg 1946
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 gaggaccgctgttctagcattggggtttgtgttgtactctgatccagaacagactccacg 361
Query: 1947 aattgtttccctcctgtcagagtcttacaatccacatgttcgatatggagcggctcttgc 2006
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 aattgtttccctcctgtcagagtcttacaatccacatgttcgatatggagcggctcttgc 421
Query: 2007 tgtgggtatttcttgtgcgggtacaggtctcagtgaggctatatctttactggagccatt 2066
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 tgtgggtatttcttgtgcgggtacaggtctcagtgaggctatatctttactggagccatt 481
Query: 2067 gacatcagatgtcgttgattttgttcgtcaaggtgccctcatagcaatggctatggtcat 2126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 gacatcagatgtcgttgattttgttcgtcaaggtgccctcatagcaatggctatggtcat 541
Query: 2127 ggttcagatcagtgaagctagtgattcacgcgttggtacattcaggcgacaattggagaa 2186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 ggttcagatcagtgaagctagtgattcacgcgttggtacattcaggcgacaattggagaa 601
Query: 2187 aattattctggacaagcatgaggataccatgagcaaaatgggagcaattttggcctctgg 2246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 aattattctggacaagcatgaggataccatgagcaaaatgggagcaattttggcctctgg 661
Query: 2247 aatccttgatgctggtggaagaaatgtgaccataagactactttccaagacaaagcatga 2306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 aatccttgatgctggtggaagaaatgtgaccataagactactttccaagacaaagcatga 721
Query: 2307 taaaattactgcagtggttgggcttgcagttttcagccagttttggtattggtaccctct 2366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 taaaattactgcagtggttgggcttgcagttttcagccagttttggtattggtaccctct 781
Query: 2367 tatctatttcataagcttgtccttttcacccacggctttgattggtctgaactatgat 2424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 tatctatttcataagcttgtccttttcacccacggctttgattggtctgaactatgat 839
>gnl|LJGI|BP042902 homologue to UniRef100_Q6XJG7 Cluster: 26S proteasome subunit RPN2a;
n=1; Arabidopsis thaliana|Rep: 26S proteasome subunit
RPN2a - Arabidopsis thaliana (Mouse-ear cress), partial
(15%)
Length = 464
Score = 906 bits (457), Expect = 0.0
Identities = 464/465 (99%), Gaps = 1/465 (0%)
Strand = Plus / Plus
Query: 971 caagtgaaaaaatgtatgctgagaggttaaacaagatcaagggaattttgtctggggaaa 1030
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 1 caagtgaaaaaatgtatgctgagaggttaaacaagatcaagggaattt-gtctggggaaa 59
Query: 1031 cttcaattcagttgacccttcagttcctttacagccataacaaatctgatctccttattc 1090
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 cttcaattcagttgacccttcagttcctttacagccataacaaatctgatctccttattc 119
Query: 1091 tgaagactataaagcagtctgtggagatgaggaatagcgtctgccacagtgctacaatat 1150
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 tgaagactataaagcagtctgtggagatgaggaatagcgtctgccacagtgctacaatat 179
Query: 1151 atgccaatgcaataatgcatgctgggacaactgtggatactttcctaagggaaaacttgg 1210
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 atgccaatgcaataatgcatgctgggacaactgtggatactttcctaagggaaaacttgg 239
Query: 1211 aatggttgagcagagctactaattgggccaaattcagtgcaacggctggtcttggtgtta 1270
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 aatggttgagcagagctactaattgggccaaattcagtgcaacggctggtcttggtgtta 299
Query: 1271 tccacagaggccatttgcagcagggaaggtcactgatggcaccgtacttacctcagggtg 1330
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 tccacagaggccatttgcagcagggaaggtcactgatggcaccgtacttacctcagggtg 359
Query: 1331 gaactggaggtggtggtagtccatactcagaaggcggtgctctctatgcccttggtctta 1390
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 gaactggaggtggtggtagtccatactcagaaggcggtgctctctatgcccttggtctta 419
Query: 1391 ttcatgctaaccatggagaaggcatcaagcaatttcttcgtgata 1435
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 ttcatgctaaccatggagaaggcatcaagcaatttcttcgtgata 464
>gnl|LJGI|TC68408 similar to UniRef100_A7QXR1 Cluster: Chromosome undetermined
scaffold_229, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_229, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(15%)
Length = 799
Score = 533 bits (269), Expect = e-150
Identities = 275/277 (99%)
Strand = Plus / Plus
Query: 2739 gattctgacaaatcctgctagggttgttcctgctcaggagaagttcatcaaatttttaca 2798
||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||
Sbjct: 128 gattctgacaaatcctgctggggttgttcctgctctggagaagttcatcaaatttttaca 187
Query: 2799 ggatagcagatatgctccagttaagttggcaccttcaggatttgtgcttctcaaagacct 2858
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggatagcagatatgctccagttaagttggcaccttcaggatttgtgcttctcaaagacct 247
Query: 2859 gcgtcctaccgagccagaagtgctcgcgattaccgtcacacccgcatcggccacttcaac 2918
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 gcgtcctaccgagccagaagtgctcgcgattaccgtcacacccgcatcggccacttcaac 307
Query: 2919 tgctgctggatcagctgctggattgcaaagttcttcatcggcaatggctgtggacgaaga 2978
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 tgctgctggatcagctgctggattgcaaagttcttcatcggcaatggctgtggacgaaga 367
Query: 2979 acctcaacctcctcaaccatttgagtactcctcatga 3015
|||||||||||||||||||||||||||||||||||||
Sbjct: 368 acctcaacctcctcaaccatttgagtactcctcatga 404
Score = 264 bits (133), Expect = 3e-69
Identities = 133/133 (100%)
Strand = Plus / Plus
Query: 2493 tacagttcccactactacttcgactgtaaaacttcccacagctgttctgtcaacatcagc 2552
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tacagttcccactactacttcgactgtaaaacttcccacagctgttctgtcaacatcagc 60
Query: 2553 taaggccaaagccagggctaagaaagcggaagagcagaaggctaatgctgaaatttcatc 2612
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 taaggccaaagccagggctaagaaagcggaagagcagaaggctaatgctgaaatttcatc 120
Query: 2613 tagtcctgattct 2625
|||||||||||||
Sbjct: 121 tagtcctgattct 133
>gnl|LJGI|TC67453 similar to UniRef100_A7QXR1 Cluster: Chromosome undetermined
scaffold_229, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_229, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(7%)
Length = 691
Score = 377 bits (190), Expect = e-103
Identities = 190/190 (100%)
Strand = Plus / Plus
Query: 2826 ggcaccttcaggatttgtgcttctcaaagacctgcgtcctaccgagccagaagtgctcgc 2885
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ggcaccttcaggatttgtgcttctcaaagacctgcgtcctaccgagccagaagtgctcgc 61
Query: 2886 gattaccgtcacacccgcatcggccacttcaactgctgctggatcagctgctggattgca 2945
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 gattaccgtcacacccgcatcggccacttcaactgctgctggatcagctgctggattgca 121
Query: 2946 aagttcttcatcggcaatggctgtggacgaagaacctcaacctcctcaaccatttgagta 3005
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 aagttcttcatcggcaatggctgtggacgaagaacctcaacctcctcaaccatttgagta 181
Query: 3006 ctcctcatga 3015
||||||||||
Sbjct: 182 ctcctcatga 191
>gnl|LJGI|AV775984 similar to UniRef100_Q9AVR9 Cluster: Choline kinase; n=1; Pisum
sativum|Rep: Choline kinase - Pisum sativum (Garden
pea), partial (8%)
Length = 446
Score = 54.0 bits (27), Expect = 5e-06
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 158 atgaagatgaggagtttgatcagcatcaaaggcaacttgctgc 200
|||||||||||||||||||||||| | |||| ||||||||||
Sbjct: 278 atgaagatgaggagtttgatcagccttcaaggaaacttgctgc 236