Miyakogusa Predicted Gene

Lj4g3v3113760.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v3113760.1 Non Chatacterized Hit- tr|I1K5H3|I1K5H3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.44868
PE,86.27,0,seg,NULL; coiled-coil,NULL; SUBFAMILY NOT NAMED,NULL; THO2
PROTEIN,NULL; Tho2,THO complex, subunitTH,CUFF.52390.1
         (5601 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP041645 homologue to UniRef100_A7P3Y6 Cluster: Chromos...  1007   0.0  
gnl|LJGI|BU494306 similar to UniRef100_A7P3Y5 Cluster: Chromosom...   567   e-160

>gnl|LJGI|BP041645 homologue to UniRef100_A7P3Y6 Cluster: Chromosome chr1 scaffold_5,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr1 scaffold_5, whole genome shotgun sequence
            - Vitis vinifera (Grape), partial (24%)
          Length = 508

 Score = 1007 bits (508), Expect = 0.0
 Identities = 508/508 (100%)
 Strand = Plus / Minus

                                                                        
Query: 2812 gatctgtatgttccgaaaaatcgttatgagtcggaaataaccaagcttcatgctaatctt 2871
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508  gatctgtatgttccgaaaaatcgttatgagtcggaaataaccaagcttcatgctaatctt 449

                                                                        
Query: 2872 aagtctttggaggagctttctgacaattcaagctcagcaatcaccaagaggaagaaagaa 2931
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448  aagtctttggaggagctttctgacaattcaagctcagcaatcaccaagaggaagaaagaa 389

                                                                        
Query: 2932 aaggaaagaattcaagaatctcttgatcgtctgactagtgaactccacaaacatgaagag 2991
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388  aaggaaagaattcaagaatctcttgatcgtctgactagtgaactccacaaacatgaagag 329

                                                                        
Query: 2992 aatgttgcatctgtccgtagaaggctttcttatgaaaaagacaaatggttaagttcctgt 3051
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328  aatgttgcatctgtccgtagaaggctttcttatgaaaaagacaaatggttaagttcctgt 269

                                                                        
Query: 3052 cctgataccttgaagattaacatggagtttcttcagcgttgtatattcccacgatgtact 3111
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268  cctgataccttgaagattaacatggagtttcttcagcgttgtatattcccacgatgtact 209

                                                                        
Query: 3112 ttcagtatgccggatgctgtttattgtgctatgtttgtgcacacacttcattcacttgga 3171
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208  ttcagtatgccggatgctgtttattgtgctatgtttgtgcacacacttcattcacttgga 149

                                                                        
Query: 3172 accccctttttcaacacagtcaaccacatagatgttctgatttgtaagaccctacaacca 3231
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148  accccctttttcaacacagtcaaccacatagatgttctgatttgtaagaccctacaacca 89

                                                                        
Query: 3232 atgatatgctgctgcactgaatatgaggtaggcaggcttggcaggtttctgtacgagact 3291
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88   atgatatgctgctgcactgaatatgaggtaggcaggcttggcaggtttctgtacgagact 29

                                        
Query: 3292 ttgaagattgcttactattggaagagtg 3319
            ||||||||||||||||||||||||||||
Sbjct: 28   ttgaagattgcttactattggaagagtg 1


>gnl|LJGI|BU494306 similar to UniRef100_A7P3Y5 Cluster: Chromosome chr1 scaffold_5,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr1 scaffold_5, whole genome shotgun sequence
            - Vitis vinifera (Grape), partial (29%)
          Length = 469

 Score =  567 bits (286), Expect = e-160
 Identities = 289/290 (99%)
 Strand = Plus / Plus

                                                                        
Query: 5312 gtaagcttaagagggagcatctaccaactggtgaacctggggagtactcaccggtggccc 5371
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    gtaagcttaagagggagcatctaccaactggtgaacctggggagtactcaccggtggccc 60

                                                                        
Query: 5372 ctcctccccctggtattggtataacacaagcatatgatggaagagacaggggagacagaa 5431
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   ctcctccccctggtattggtataacacaagcatatgatggaagagacaggggagacagaa 120

                                                                        
Query: 5432 aaggacccatgatccagcatgcaagttacatagatgaaccgggtctcaagattcacagta 5491
            |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 121  aaggacccatgatccagcatgcaagttacatagatgaaccgggtctcaggattcacagta 180

                                                                        
Query: 5492 aagaggtagccggcaagatgaatcgtcgtgattcagatcccttgtatgaccgtgaatggg 5551
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  aagaggtagccggcaagatgaatcgtcgtgattcagatcccttgtatgaccgtgaatggg 240

                                                              
Query: 5552 atgatgagaagagacaaagagctgatcaaaagcgaaggcaccggaagtaa 5601
            ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241  atgatgagaagagacaaagagctgatcaaaagcgaaggcaccggaagtaa 290