Miyakogusa Predicted Gene
- Lj4g3v3113360.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v3113360.1 Non Chatacterized Hit- tr|A5C4G4|A5C4G4_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,40.68,3e-18,seg,NULL; DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR
CLASS), PUTATIVE,NULL; LEUCINE-RICH REPEAT-CONTAIN,CUFF.52343.1
(2322 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BP085074 similar to UniRef100_A6FCH2 Cluster: GGDEF dom... 242 8e-63
gnl|LJGI|GO004933 weakly similar to UniRef100_Q3IA99 Cluster: Di... 161 2e-38
gnl|LJGI|TC62701 similar to UniRef100_A3CYW8 Cluster: Protoheme ... 111 2e-23
gnl|LJGI|TC79632 weakly similar to UniRef100_Q3IA99 Cluster: Dis... 92 2e-17
gnl|LJGI|TC82468 weakly similar to UniRef100_Q3IA99 Cluster: Dis... 74 4e-12
>gnl|LJGI|BP085074 similar to UniRef100_A6FCH2 Cluster: GGDEF domain protein; n=1;
Moritella sp. PE36|Rep: GGDEF domain protein - Moritella
sp. PE36, partial (5%)
Length = 440
Score = 242 bits (122), Expect = 8e-63
Identities = 122/122 (100%)
Strand = Plus / Minus
Query: 2201 gcttgcttttgaatatcagaaaatatgggaagccatattctaagccagctttcacggtaa 2260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gcttgcttttgaatatcagaaaatatgggaagccatattctaagccagctttcacggtaa 381
Query: 2261 aagagtgtggaatatgccctctttatgccaaagaaaaaagaagagtatggcgttgctggt 2320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 aagagtgtggaatatgccctctttatgccaaagaaaaaagaagagtatggcgttgctggt 321
Query: 2321 ga 2322
||
Sbjct: 320 ga 319
>gnl|LJGI|GO004933 weakly similar to UniRef100_Q3IA99 Cluster: Disease resistance
protein; n=1; Phaseolus vulgaris|Rep: Disease resistance
protein - Phaseolus vulgaris (Kidney bean) (French bean),
partial (9%)
Length = 651
Score = 161 bits (81), Expect = 2e-38
Identities = 178/209 (85%), Gaps = 1/209 (0%)
Strand = Plus / Plus
Query: 1480 gttgtgagccttccagagagtgttgctcatctatcaagcttgaaatcacttgacttgagt 1539
||||||| ||||||||||||| |||||||||| |||| ||||||||||||| | | |||
Sbjct: 388 gttgtgaaccttccagagagtattgctcatctttcaaccttgaaatcacttaatgtcagt 447
Query: 1540 gattgcaaaaagcttgaatgtatcccaaagcttccaccatatctaaaacagttgctggcg 1599
| ||||| ||||||||||||||||||||| |||||||||| ||| ||| ||| ||||
Sbjct: 448 ggttgcagaaagcttgaatgtatcccaaaacttccaccatttctgaaatggttattggca 507
Query: 1600 tttgattgtccatccattagaagagtgatgtcaaactcaaggtttgaactcccatcaggt 1659
|||||||| |||||||||| ||||||||| ||||| |||| ||| ||| ||| |||| |
Sbjct: 508 tttgattgcccatccattacaagagtgatttcaaattcaacgttcaaacacccttcagat 567
Query: 1660 tccaaagagggcaccttcaaatttcattt 1688
|||||||| || |||||| ||||||||||
Sbjct: 568 tccaaaga-ggtaccttccaatttcattt 595
Score = 85.7 bits (43), Expect = 1e-15
Identities = 100/119 (84%)
Strand = Plus / Plus
Query: 1337 atcttgagtcacttccaaacagcattgctaatctaagccttctatccgagcttgattgtt 1396
|||| ||||||||||||||||||||| ||||||| |||||||| ||||||| ||||
Sbjct: 38 atctggagtcacttccaaacagcatttgcaatctaaagcttctatctaagcttgactgtt 97
Query: 1397 caggctgcggcaaattaactaaaatcccaaatgatattggttgcttgtcatccttaagg 1455
|||| || |||| ||||| ||||||||||||| ||||| |||||||||| ||||||
Sbjct: 98 caggttgtcgcaacttaacagaaatcccaaatgacattggccgcttgtcatcattaagg 156
Score = 67.9 bits (34), Expect = 3e-10
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 1481 ttgtgagccttccagagagtgttgctcatctatcaagcttgaaatcactt 1530
|||||| ||||||||||||| |||||||||| ||||||||||| ||||||
Sbjct: 251 ttgtgaaccttccagagagtattgctcatctttcaagcttgaactcactt 300
>gnl|LJGI|TC62701 similar to UniRef100_A3CYW8 Cluster: Protoheme IX farnesyltransferase
precursor; n=2; Shewanella baltica|Rep: Protoheme IX
farnesyltransferase precursor - Shewanella baltica
(strain OS155 / ATCC BAA-1091), partial (7%)
Length = 881
Score = 111 bits (56), Expect = 2e-23
Identities = 116/136 (85%)
Strand = Plus / Plus
Query: 1785 ttgctttccagggagtgcagttccacaatggtttccttaccgttgcgagggacattcagt 1844
|||||||||||||||||| |||||| | ||||| ||||| || ||||||||| |||||||
Sbjct: 170 ttgctttccagggagtgcggttccatattggttcccttatcgatgcgagggagattcagt 229
Query: 1845 aactgcaagtaaagattctctaaattggttcagtgataacagactcattggtttcgccct 1904
||||| |||||||||||||||||||| || ||||||||| ||||| ||||| || |
Sbjct: 230 aactgtggataaagattctctaaattggtgcaatgataacaggctcatcggttttgctat 289
Query: 1905 atgtgtcgttttgcaa 1920
||| |||||||||||
Sbjct: 290 gtgtttcgttttgcaa 305
>gnl|LJGI|TC79632 weakly similar to UniRef100_Q3IA99 Cluster: Disease resistance
protein; n=1; Phaseolus vulgaris|Rep: Disease resistance
protein - Phaseolus vulgaris (Kidney bean) (French bean),
partial (18%)
Length = 487
Score = 91.7 bits (46), Expect = 2e-17
Identities = 166/206 (80%)
Strand = Plus / Plus
Query: 835 tgtgaatcacttaccagccttccaattgacatttgtaagttgaaatttctaagaagactt 894
|||||||| ||||| ||||||||||| ||| ||||||||||||||| || |||||||||
Sbjct: 64 tgtgaatcccttacaagccttccaatcgacctttgtaagttgaaatcgcttagaagactt 123
Query: 895 tatctccgtggttgctcaaatttggagaatttccctgaaattgaggatacaatggaaaat 954
|||| | ||||| ||||||||| || ||||||||||| ||| ||||||||| ||
Sbjct: 124 gatctgaattgttgcaaaaatttggaaaaattccctgaaatcatggagacaatggaacat 183
Query: 955 ttaaaggtgctcatcttagatgaaacagctataaagaaactaccttcatccttgcaccga 1014
||| ||||| ||||||| |||||||| || | ||||||| ||||||||||||
Sbjct: 184 ttagctgtgcttatcttaggcgaaacagcaattcaagcactacctgcatccttgcacctt 243
Query: 1015 tttgttgggcttgaagagttgagctt 1040
|| || ||||||| ||| ||||||||
Sbjct: 244 ttggtggggcttggagaattgagctt 269
Score = 60.0 bits (30), Expect = 7e-08
Identities = 144/182 (79%)
Strand = Plus / Plus
Query: 1349 ttccaaacagcattgctaatctaagccttctatccgagcttgattgttcaggctgcggca 1408
|||||||||||||| |||||||| ||||| || ||||||| ||||||||||| || |
Sbjct: 296 ttccaaacagcatttgtaatctaaagcttctctctaagcttgactgttcaggctgtggta 355
Query: 1409 aattaactaaaatcccaaatgatattggttgcttgtcatccttaagggaatggtcactgc 1468
||||||| ||| ||| |||| || ||| || || ||| |||||| ||| ||||||||
Sbjct: 356 aattaacaggaataccagatgacataggtcgcatgctatcattaaggaaattgtcactgc 415
Query: 1469 atgatagcggtgttgtgagccttccagagagtgttgctcatctatcaagcttgaaatcac 1528
| | | | | |||| ||||||||| ||| |||||||||| ||||||||| ||||||
Sbjct: 416 aaggcaccaaaatcgtgaaccttccagatagtattgctcatctttcaagcttggaatcac 475
Query: 1529 tt 1530
||
Sbjct: 476 tt 477
>gnl|LJGI|TC82468 weakly similar to UniRef100_Q3IA99 Cluster: Disease resistance
protein; n=1; Phaseolus vulgaris|Rep: Disease resistance
protein - Phaseolus vulgaris (Kidney bean) (French
bean), partial (21%)
Length = 918
Score = 73.8 bits (37), Expect = 4e-12
Identities = 59/65 (90%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 161 aaaatcttgttaaacttgatatgcgtcatagccaccttgaacaactttgggagggagata 220
||||||||||||||||||||||||| ||||||| ||||||| ||||||||||| ||||
Sbjct: 807 aaaatcttgttaaacttgatatgcgcgatagccatcttgaac-actttgggaggaagatc 865
Query: 221 aggat 225
|||||
Sbjct: 866 aggat 870