Miyakogusa Predicted Gene

Lj4g3v3113180.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v3113180.1 tr|D7KAK3|D7KAK3_ARALL At1g68060/T23K23_9
OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_890198
P,74.24,2e-19,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
coiled-coil,NULL; Myosin_HC-like,Myosin II heavy ch,CUFF.52341.1
         (262 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC68681 similar to UniRef100_A7P3V5 Cluster: Chromosome...   258   1e-68
gnl|LJGI|TC71590 similar to UniRef100_A7P3V5 Cluster: Chromosome...   161   3e-39
gnl|LJGI|TC67817 homologue to UniRef100_A0FI88 Cluster: SMAP1; n...    82   2e-15

>gnl|LJGI|TC68681 similar to UniRef100_A7P3V5 Cluster: Chromosome chr1 scaffold_5,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr1 scaffold_5, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (6%)
          Length = 836

 Score =  258 bits (130), Expect = 1e-68
 Identities = 137/138 (99%), Gaps = 1/138 (0%)
 Strand = Plus / Plus

                                                                       
Query: 76  atgagaagggaagtagcttccatggagaaggaggtagctgcaatgcgtatagagaaagaa 135
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   atgagaagggaagtagcttccatggagaaggaggtagctgcaatgcgtatagagaaagaa 60

                                                                       
Query: 136 caagatagca-gatcaaagcgtttcagcagtgtaaagggccctatgaacagtgctcagca 194
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  caagatagcaggatcaaagcgtttcagcagtgtaaagggccctatgaacagtgctcagca 120

                             
Query: 195 tcagcttgtttccgggag 212
           ||||||||||||||||||
Sbjct: 121 tcagcttgtttccgggag 138


>gnl|LJGI|TC71590 similar to UniRef100_A7P3V5 Cluster: Chromosome chr1 scaffold_5,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr1 scaffold_5, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (9%)
          Length = 622

 Score =  161 bits (81), Expect = 3e-39
 Identities = 120/133 (90%)
 Strand = Plus / Plus

                                                                       
Query: 68  caaagaagatgagaagggaagtagcttccatggagaaggaggtagctgcaatgcgtatag 127
           ||||||||||||||||||||||||| |||||||| |||||||||||||| |||||| | |
Sbjct: 1   caaagaagatgagaagggaagtagcctccatggaaaaggaggtagctgctatgcgtgtgg 60

                                                                       
Query: 128 agaaagaacaagatagcagatcaaagcgtttcagcagtgtaaagggccctatgaacagtg 187
           | ||||||||||| | |||| ||||||| ||||||||||||||||| ||| | |||||||
Sbjct: 61  ataaagaacaagagaacagagcaaagcgattcagcagtgtaaaggggcctgtaaacagtg 120

                        
Query: 188 ctcagcatcagct 200
           |||||||||||||
Sbjct: 121 ctcagcatcagct 133


>gnl|LJGI|TC67817 homologue to UniRef100_A0FI88 Cluster: SMAP1; n=1; Canis lupus
           familiaris|Rep: SMAP1 - Canis familiaris (Dog), partial
           (4%)
          Length = 625

 Score = 81.8 bits (41), Expect = 2e-15
 Identities = 62/69 (89%)
 Strand = Plus / Plus

                                                                       
Query: 132 agaacaagatagcagatcaaagcgtttcagcagtgtaaagggccctatgaacagtgctca 191
           ||||||||| | |||| ||||||| ||||||||||||||||| ||| | |||||||||||
Sbjct: 2   agaacaagagaacagagcaaagcgattcagcagtgtaaaggggcctgtaaacagtgctca 61

                    
Query: 192 gcatcagct 200
           |||||||||
Sbjct: 62  gcatcagct 70