Miyakogusa Predicted Gene
- Lj4g3v3113150.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v3113150.1 Non Chatacterized Hit- tr|I1K5K4|I1K5K4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.3401 PE=,79.42,0,no
description,Zinc finger, RING/FYVE/PHD-type; RING/U-box,NULL;
INTEGRATOR COMPLEX SUBUNIT 11,NULL;,CUFF.52329.1
(1038 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC65678 similar to UniRef100_A7P3V3 Cluster: Chromosome... 2050 0.0
gnl|LJGI|TC80085 similar to UniRef100_A7P3V3 Cluster: Chromosome... 264 1e-69
gnl|LJGI|BP043897 homologue to UniRef100_A7P3V3 Cluster: Chromos... 101 9e-21
gnl|LJGI|TC81930 weakly similar to UniRef100_Q93Z92 Cluster: E3 ... 54 2e-06
gnl|LJGI|TC71344 weakly similar to UniRef100_A7PXY8 Cluster: Chr... 54 2e-06
>gnl|LJGI|TC65678 similar to UniRef100_A7P3V3 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (75%)
Length = 1663
Score = 2050 bits (1034), Expect = 0.0
Identities = 1037/1038 (99%)
Strand = Plus / Plus
Query: 1 atggcatcgccttactccgcccctcagccccacgcgccactcctccgcccccgccgcgat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96 atggcatcgccttactccgcccctcagccccacgcgccactcctccgcccccgccgcgat 155
Query: 61 ggctcccgacctcccatcctcgcgctcctcctcggccgccgcggcccttccgtgctggtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 ggctcccgacctcccatcctcgcgctcctcctcggccgccgcggcccttccgtgctggtc 215
Query: 121 cgcgagacagcagcgcgtgagctggaggagcggcgtgccgactggggctactcgaagccg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 cgcgagacagcagcgcgtgagctggaggagcggcgtgccgactggggctactcgaagccg 275
Query: 181 gtggtggcccttgacatggcgtggaacatggcctttgtggtggtctccgtggtgatgctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 gtggtggcccttgacatggcgtggaacatggcctttgtggtggtctccgtggtgatgctc 335
Query: 241 ggtttcaccctccaggagaatcctaacacgccgatccggttgtggatctgcggttacgcg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 ggtttcaccctccaggagaatcctaacacgccgatccggttgtggatctgcggttacgcg 395
Query: 301 gttcagtgcctggttcacctcgtgctggtgtggctcgagtacaggaggaggaaccggagg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 gttcagtgcctggttcacctcgtgctggtgtggctcgagtacaggaggaggaaccggagg 455
Query: 361 ggacacggcatggaatctggtaacaaccttgacgatgacgttgacaacagtgaggatgat 420
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 456 ggacacggcatggaatctggtaacaaccttgacgatgacgttgacgacagtgaggatgat 515
Query: 421 gatgttggggttggaagctctgggaattcctctagctatggattcgtaaaacgatgtgca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 gatgttggggttggaagctctgggaattcctctagctatggattcgtaaaacgatgtgca 575
Query: 481 tcattcaataccatggtttcattgctttggtggatggtgggcttttactgggtagtctgt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 tcattcaataccatggtttcattgctttggtggatggtgggcttttactgggtagtctgt 635
Query: 541 ggtggtgatgttcttctgcaagatgctccacgtttgtactggttggctgttgtctttctg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 ggtggtgatgttcttctgcaagatgctccacgtttgtactggttggctgttgtctttctg 695
Query: 601 gcatttgatgtcttctttgccatcttttgtgttgttttggcatgcttgattggcattgcc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 gcatttgatgtcttctttgccatcttttgtgttgttttggcatgcttgattggcattgcc 755
Query: 661 ctctgctgttgtttgccatgtattattggtattctctatgctgttgctggacaggagggt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 756 ctctgctgttgtttgccatgtattattggtattctctatgctgttgctggacaggagggt 815
Query: 721 gcatctgaatcagatatcggcgtacttccaaaatacagatttcaaatgtcaagcaatggg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 816 gcatctgaatcagatatcggcgtacttccaaaatacagatttcaaatgtcaagcaatggg 875
Query: 781 gaaacacctagtgaaggaggtggatcaatggttcccctagaaaccggcatcggtttcccg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 876 gaaacacctagtgaaggaggtggatcaatggttcccctagaaaccggcatcggtttcccg 935
Query: 841 gcaaatgaacgagcactttcacccgaggatgcggagtgctgtatatgcatctcttcttat 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 936 gcaaatgaacgagcactttcacccgaggatgcggagtgctgtatatgcatctcttcttat 995
Query: 901 gaggatggagcagaacttcattctcttccatgtaaccatcatttccattctacatgcata 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 996 gaggatggagcagaacttcattctcttccatgtaaccatcatttccattctacatgcata 1055
Query: 961 gtgaagtggttaaagatgaatgcaacttgtcctctttgcaagtacaatattcttaaggga 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1056 gtgaagtggttaaagatgaatgcaacttgtcctctttgcaagtacaatattcttaaggga 1115
Query: 1021 aatgaacaggtttaatgg 1038
||||||||||||||||||
Sbjct: 1116 aatgaacaggtttaatgg 1133
>gnl|LJGI|TC80085 similar to UniRef100_A7P3V3 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (44%)
Length = 791
Score = 264 bits (133), Expect = 1e-69
Identities = 190/209 (90%)
Strand = Plus / Plus
Query: 506 tttggtggatggtgggcttttactgggtagtctgtggtggtgatgttcttctgcaagatg 565
|||||||||||||||||||||||||||| |||| |||||||||| | ||| |||| ||||
Sbjct: 7 tttggtggatggtgggcttttactgggttgtctctggtggtgatatgcttatgcaggatg 66
Query: 566 ctccacgtttgtactggttggctgttgtctttctggcatttgatgtcttctttgccatct 625
| ||||| |||||||||||||||||||| |||||||| |||||||| |||||||||||||
Sbjct: 67 ccccacggttgtactggttggctgttgtttttctggcttttgatgtattctttgccatct 126
Query: 626 tttgtgttgttttggcatgcttgattggcattgccctctgctgttgtttgccatgtatta 685
| |||||||||||||||||||||||||||||||| ||||| ||||| ||||| || || |
Sbjct: 127 tctgtgttgttttggcatgcttgattggcattgctctctgttgttgcttgccctgcatca 186
Query: 686 ttggtattctctatgctgttgctggacag 714
||| |||||||||||||||||||||||||
Sbjct: 187 ttgctattctctatgctgttgctggacag 215
Score = 184 bits (93), Expect = 7e-46
Identities = 231/277 (83%)
Strand = Plus / Plus
Query: 755 acagatttcaaatgtcaagcaatggggaaacacctagtgaaggaggtggatcaatggttc 814
||||||||||||| || ||||| ||||| ||||||| |||| |||||||||||||
Sbjct: 212 acagatttcaaatactaaacaatgaggaaaagcctagtggtggagccggatcaatggttc 271
Query: 815 ccctagaaaccggcatcggtttcccggcaaatgaacgagcactttcacccgaggatgcgg 874
|| ||||||| ||| | || | |||||||||| || |||||| ||| ||||||||||
Sbjct: 272 ccacagaaaccagcagtgcttacttggcaaatgaaagaacacttttacctgaggatgcgg 331
Query: 875 agtgctgtatatgcatctcttcttatgaggatggagcagaacttcattctcttccatgta 934
| |||||||||||| ||| ||| |||||||| |||| ||| || ||| ||||||| ||
Sbjct: 332 aatgctgtatatgcctctgttcatatgaggacggagtagagctccatgctcttccctgcc 391
Query: 935 accatcatttccattctacatgcatagtgaagtggttaaagatgaatgcaacttgtcctc 994
| |||||||||||| || |||||||||| || ||| |||||||||||||||||||||| |
Sbjct: 392 atcatcatttccatgcttcatgcatagtcaaatggctaaagatgaatgcaacttgtcccc 451
Query: 995 tttgcaagtacaatattcttaagggaaatgaacaggt 1031
||||| ||||||||||||| |||||||| ||||||||
Sbjct: 452 tttgccagtacaatattctcaagggaaacgaacaggt 488
>gnl|LJGI|BP043897 homologue to UniRef100_A7P3V3 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (13%)
Length = 472
Score = 101 bits (51), Expect = 9e-21
Identities = 84/95 (88%)
Strand = Plus / Plus
Query: 94 ggccgccgcggcccttccgtgctggtccgcgagacagcagcgcgtgagctggaggagcgg 153
||||| || ||||| || |||||||| || |||||||| ||||| ||||| |||||||||
Sbjct: 374 ggccgacgaggcccgtcggtgctggtgcgggagacagcggcgcgcgagctcgaggagcgg 433
Query: 154 cgtgccgactggggctactcgaagccggtggtggc 188
|| ||||||||||| ||||||||||||||||||||
Sbjct: 434 cgcgccgactggggatactcgaagccggtggtggc 468
>gnl|LJGI|TC81930 weakly similar to UniRef100_Q93Z92 Cluster: E3 ubiquitin-protein
ligase At4g11680; n=1; Arabidopsis thaliana|Rep: E3
ubiquitin-protein ligase At4g11680 - Arabidopsis
thaliana (Mouse-ear cress), partial (21%)
Length = 487
Score = 54.0 bits (27), Expect = 2e-06
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 169 tactcgaagccggtggtggcccttgacatggcgtggaac 207
|||||||||||||||||||| || ||| |||||||||||
Sbjct: 314 tactcgaagccggtggtggcgctggacctggcgtggaac 352
>gnl|LJGI|TC71344 weakly similar to UniRef100_A7PXY8 Cluster: Chromosome chr15
scaffold_37, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr15 scaffold_37, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (40%)
Length = 726
Score = 54.0 bits (27), Expect = 2e-06
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 169 tactcgaagccggtggtggcccttgacatggcgtggaac 207
|||||||||||||||||||| || ||| |||||||||||
Sbjct: 262 tactcgaagccggtggtggcgctggacctggcgtggaac 300