Miyakogusa Predicted Gene
- Lj4g3v3113090.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v3113090.1 CUFF.52327.1
(2082 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC62832 similar to UniRef100_A7P3U9 Cluster: Chromosome... 607 e-172
gnl|LJGI|TC79126 similar to UniRef100_A7P3U9 Cluster: Chromosome... 515 e-145
gnl|LJGI|FS336491 homologue to UniRef100_A7P3U9 Cluster: Chromos... 406 e-112
gnl|LJGI|DC593058 homologue to UniRef100_A7P3U9 Cluster: Chromos... 347 2e-94
gnl|LJGI|AV779778 similar to UniRef100_A7P3U9 Cluster: Chromosom... 212 7e-54
gnl|LJGI|TC65008 similar to UniRef100_Q10PS3 Cluster: HEAT repea... 176 4e-43
>gnl|LJGI|TC62832 similar to UniRef100_A7P3U9 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (9%)
Length = 777
Score = 607 bits (306), Expect = e-172
Identities = 306/306 (100%)
Strand = Plus / Plus
Query: 1777 cagcaaagtgctgccttcaagatactaaaaactcgtttaaaagctgtgccatcgttttct 1836
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cagcaaagtgctgccttcaagatactaaaaactcgtttaaaagctgtgccatcgttttct 60
Query: 1837 ttcaatggtgagcaattgaagaaaacatcctcagggaatccctatcaatttctacaccac 1896
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttcaatggtgagcaattgaagaaaacatcctcagggaatccctatcaatttctacaccac 120
Query: 1897 atgtctggtggatctcatacttctgaggatggtgacataactgctgatagtgggaactca 1956
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atgtctggtggatctcatacttctgaggatggtgacataactgctgatagtgggaactca 180
Query: 1957 cacaacgggataaattttgctgcaaggctacaacagtttcaacaaatgcagcgccagcat 2016
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cacaacgggataaattttgctgcaaggctacaacagtttcaacaaatgcagcgccagcat 240
Query: 2017 cgtgtgcatatgaaagtacagacactgtctcgcaaaaattccccttccttgtccaaggag 2076
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cgtgtgcatatgaaagtacagacactgtctcgcaaaaattccccttccttgtccaaggag 300
Query: 2077 gcacaa 2082
||||||
Sbjct: 301 gcacaa 306
>gnl|LJGI|TC79126 similar to UniRef100_A7P3U9 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (12%)
Length = 576
Score = 515 bits (260), Expect = e-145
Identities = 260/260 (100%)
Strand = Plus / Plus
Query: 1 atggccgacgctctctcgttgattccggcagccgtgctccgcaaccttgctgacaagctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 atggccgacgctctctcgttgattccggcagccgtgctccgcaaccttgctgacaagctc 376
Query: 61 tatgagaagcggaagaatgctgctcttgagattgaggggatagtgaagcagctagctact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 tatgagaagcggaagaatgctgctcttgagattgaggggatagtgaagcagctagctact 436
Query: 121 ggtggtgatcatgataagatagcggctgtggtcaaattgttgactactgaattcacattc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 ggtggtgatcatgataagatagcggctgtggtcaaattgttgactactgaattcacattc 496
Query: 181 tcaccacaagccaatcagagaaagggaggattgattggattagctgctgcaactgttggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 tcaccacaagccaatcagagaaagggaggattgattggattagctgctgcaactgttggg 556
Query: 241 ttggcttctgaagcagctca 260
||||||||||||||||||||
Sbjct: 557 ttggcttctgaagcagctca 576
>gnl|LJGI|FS336491 homologue to UniRef100_A7P3U9 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (21%)
Length = 590
Score = 406 bits (205), Expect = e-112
Identities = 379/437 (86%)
Strand = Plus / Plus
Query: 7 gacgctctctcgttgattccggcagccgtgctccgcaaccttgctgacaagctctatgag 66
|||||||||||| || ||||||| ||||||||||||||||| || ||||||||||| |||
Sbjct: 154 gacgctctctcggtggttccggcggccgtgctccgcaacctcgccgacaagctctacgag 213
Query: 67 aagcggaagaatgctgctcttgagattgaggggatagtgaagcagctagctactggtggt 126
||||| |||||||||||||| ||| ||||||||||| |||||||||| ||||||| ||
Sbjct: 214 aagcgcaagaatgctgctctcgaggttgaggggatactgaagcagcttgctactgccggg 273
Query: 127 gatcatgataagatagcggctgtggtcaaattgttgactactgaattcacattctcacca 186
|||||||| |||||| | |||||| |||| ||| ||||||| |||| ||| | ||| |||
Sbjct: 274 gatcatgacaagataactgctgtgatcaatttgctgactacggaatacacttactcccca 333
Query: 187 caagccaatcagagaaagggaggattgattggattagctgctgcaactgttgggttggct 246
||||| ||||| | |||||||| || || || ||||||||||| |||||||||||| ||
Sbjct: 334 caagcaaatcaccgcaagggaggtttaataggcttagctgctgctactgttgggttgact 393
Query: 247 tctgaagcagctcagcatcttgagcatattgtgcccccggtgttaaattctttctctgac 306
|||||| |||||||||||||||| |||||||| || || |||||||||| |||||
Sbjct: 394 aatgaagcttctcagcatcttgagcaaattgtgcctcctgtactaaattctttttctgat 453
Query: 307 caagatagcagagttcgttattatgcttgtgaagctctatataacattgctaaggttgtg 366
||||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 454 caagatagcagagttcgatattatgcttgtgaagcactatataacatagctaaggttgtg 513
Query: 367 agaggggattttattgtattcttcaaccagatttttgatgccttatgcaagctttctgca 426
||||| || |||||| ||| |||||||||||| ||||||||||||||||||||||| ||
Sbjct: 514 agaggagagtttattatatacttcaaccagatctttgatgccttatgcaagctttccgct 573
Query: 427 gactcagacgccaatgt 443
|||||||| | ||||||
Sbjct: 574 gactcagatggcaatgt 590
>gnl|LJGI|DC593058 homologue to UniRef100_A7P3U9 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (21%)
Length = 591
Score = 347 bits (175), Expect = 2e-94
Identities = 268/299 (89%)
Strand = Plus / Plus
Query: 438 caatgtacaaagtgctgcgcacctcttagatcgacttgtgaaggatatcgtgactgaaag 497
|||||||||||||||||| || |||||||| ||||| ||||||||||| |||||||||||
Sbjct: 235 caatgtacaaagtgctgctcagctcttagaccgactcgtgaaggatattgtgactgaaag 294
Query: 498 tgatcaattcagtattgaggaatttataccgctgctaagggagcgcatgaatgtattgaa 557
||| || ||||||||||| |||| ||||| || | |||||| |||||| |||||||||
Sbjct: 295 tgaccagttcagtattgaagaatccataccagtgttgagggagtgcatgagtgtattgaa 354
Query: 558 tccatatgtccgccagtttttggtgggatggattacggtattggacagtgtcccagatat 617
||||| ||| ||||||||||||| ||||||||||| || ||||||||||||||||||||
Sbjct: 355 tccatttgttcgccagtttttggaaggatggattactgtgttggacagtgtcccagatat 414
Query: 618 cgatatgctgggctttcttcctgattttcttgatggcttgtttaatatgttgagtgattc 677
||||||||||| |||||||||||||||||||| || ||||||||||||||||| |||||
Sbjct: 415 tgatatgctgggttttcttcctgattttcttgacggtttgtttaatatgttgagcgattc 474
Query: 678 aagtcatgaaatacgtcaacaagctgattcagctctttcagagttccttcaagagatta 736
|||||||||| ||||||||||||||||||| |||||||| ||||| |||||||||||||
Sbjct: 475 aagtcatgaagtacgtcaacaagctgattctgctctttctgagtttcttcaagagatta 533
Score = 99.6 bits (50), Expect = 7e-20
Identities = 83/94 (88%)
Strand = Plus / Plus
Query: 268 gagcatattgtgcccccggtgttaaattctttctctgaccaagatagcagagttcgttat 327
||||| ||||||| || || ||||||||||| ||||| ||||||||||||||| | |||
Sbjct: 123 gagcaaattgtgcttcctgtattaaattctttttctgatcaagatagcagagtttgatat 182
Query: 328 tatgcttgtgaagctctatataacattgctaagg 361
|||||||||||||| ||||||||||| |||||||
Sbjct: 183 tatgcttgtgaagcactatataacatagctaagg 216
>gnl|LJGI|AV779778 similar to UniRef100_A7P3U9 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (8%)
Length = 493
Score = 212 bits (107), Expect = 7e-54
Identities = 150/163 (92%), Gaps = 1/163 (0%)
Strand = Plus / Minus
Query: 748 tctgtagattatggtcgaatggctgaaatactggtacagagggcaggctctccagatgaa 807
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
Sbjct: 385 tctgtagattatggtcgaatggctgaaattctggtacagagggcaggctctccagatgca 326
Query: 808 tttactaggctaacagctatcacatggataaatgagtttgtcaaacttgg-tggagacca 866
|||||||||||||| |||| ||||||||||| |||||||| ||||||| |||||||||
Sbjct: 325 tttactaggctaaccactatggcatggataaatcagtttgtctaacttggctggagacca 266
Query: 867 gcttgttccatattatgctgacattcttggagccattttgcct 909
|||| |||||||||||||| || || |||||||||||||||||
Sbjct: 265 gctttttccatattatgctaaccttgttggagccattttgcct 223
>gnl|LJGI|TC65008 similar to UniRef100_Q10PS3 Cluster: HEAT repeat family protein,
expressed; n=1; Oryza sativa Japonica Group|Rep: HEAT
repeat family protein, expressed - Oryza sativa subsp.
japonica (Rice), partial (11%)
Length = 715
Score = 176 bits (89), Expect = 4e-43
Identities = 140/157 (89%)
Strand = Plus / Plus
Query: 1702 agattgcagcttctcgaacctggaagatatccatggttgtttaaagccttgtatggtctt 1761
||||| |||||||| || |||||||||||| | ||||| || ||||| ||| ||||||||
Sbjct: 3 agattacagcttcttgagcctggaagatatacctggttattcaaagcattgcatggtctt 62
Query: 1762 ctcatgttgcttcctcagcaaagtgctgccttcaagatactaaaaactcgtttaaaagct 1821
|| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 63 ctgatgttgcttcctcagcaaagtgccgcctttaagatactaaaaactcgtttaaaagct 122
Query: 1822 gtgccatcgttttctttcaatggtgagcaattgaaga 1858
||||| || ||||||||||| ||||||||||||||
Sbjct: 123 gtgccgtcaaattctttcaatgttgagcaattgaaga 159