Miyakogusa Predicted Gene

Lj4g3v3113050.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v3113050.1 Non Chatacterized Hit- tr|I3JYH2|I3JYH2_ORENI
Uncharacterized protein OS=Oreochromis niloticus
GN=SE,25.4,3e-18,Rubis-subs-bind,Rubisco LS methyltransferase,
substrate-binding domain; SET,SET domain; SET domain,N,CUFF.52319.1
         (1419 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC78938 similar to UniRef100_A7P3U6 Cluster: Chromosome...   783   0.0  
gnl|LJGI|TC69487 similar to UniRef100_A7P3U5 Cluster: Chromosome...   396   e-109

>gnl|LJGI|TC78938 similar to UniRef100_A7P3U6 Cluster: Chromosome chr1 scaffold_5,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr1 scaffold_5, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (26%)
          Length = 720

 Score =  783 bits (395), Expect = 0.0
 Identities = 395/395 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggctacatcgaagatggtcatgtcttcgctgacccacttgcgtccactaacctgcgcc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 atggctacatcgaagatggtcatgtcttcgctgacccacttgcgtccactaacctgcgcc 385

                                                                       
Query: 61  gcctccgcatcacgaatagtgtctcatccacctgaccttatcaactgggttaccagagaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 gcctccgcatcacgaatagtgtctcatccacctgaccttatcaactgggttaccagagaa 445

                                                                       
Query: 121 ggtggcttcgtgcaccgtgcggtgaagatagctcagcttggctccaatggtttaggacta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 ggtggcttcgtgcaccgtgcggtgaagatagctcagcttggctccaatggtttaggacta 505

                                                                       
Query: 181 gttgctaagcaagaaattccaatgggcagtgagcttattgttcttcctcaccatattcct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 gttgctaagcaagaaattccaatgggcagtgagcttattgttcttcctcaccatattcct 565

                                                                       
Query: 241 ctgcagtttccctctcttgatgtcaaccctcatgactctgcattgcttcaactggttcac 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 ctgcagtttccctctcttgatgtcaaccctcatgactctgcattgcttcaactggttcac 625

                                                                       
Query: 301 catgttcctgaggaactgtgggcgttaaaactgggtttgaagcttctgcaagaaagagca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 catgttcctgaggaactgtgggcgttaaaactgggtttgaagcttctgcaagaaagagca 685

                                              
Query: 361 aaagttggatcctattggtggccatacatcagcaa 395
           |||||||||||||||||||||||||||||||||||
Sbjct: 686 aaagttggatcctattggtggccatacatcagcaa 720


>gnl|LJGI|TC69487 similar to UniRef100_A7P3U5 Cluster: Chromosome chr1 scaffold_5,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr1 scaffold_5, whole genome shotgun sequence
            - Vitis vinifera (Grape), partial (38%)
          Length = 570

 Score =  396 bits (200), Expect = e-109
 Identities = 203/204 (99%)
 Strand = Plus / Plus

                                                                        
Query: 1216 gctctgtgtgtcattgcactgggacactttcccacccaaatagcagatgatgaatcactg 1275
            ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1    gctctgtgtgtcattgcactgggacactttccctcccaaatagcagatgatgaatcactg 60

                                                                        
Query: 1276 ttgaagcagggcgctccaggttcaactgagttagccattcagttcagaatgcaaaagaaa 1335
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   ttgaagcagggcgctccaggttcaactgagttagccattcagttcagaatgcaaaagaaa 120

                                                                        
Query: 1336 tctgtgattatagatgttgtgagagatctctcaaggagggtaaagcttctctcatcaaag 1395
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  tctgtgattatagatgttgtgagagatctctcaaggagggtaaagcttctctcatcaaag 180

                                    
Query: 1396 gaaacagtgaccgccgagggctaa 1419
            ||||||||||||||||||||||||
Sbjct: 181  gaaacagtgaccgccgagggctaa 204