Miyakogusa Predicted Gene
- Lj4g3v3112970.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v3112970.1 Non Chatacterized Hit- tr|I3T9N3|I3T9N3_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,98.74,0,UBC-like,Ubiquitin-conjugating enzyme/RWD-like; no
description,Ubiquitin-conjugating enzyme/RWD-like,CUFF.52308.1
(480 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC57912 homologue to UniRef100_Q45W76 Cluster: Ubiquiti... 952 0.0
gnl|LJGI|TC71623 homologue to UniRef100_A7PP67 Cluster: Chromoso... 82 4e-15
gnl|LJGI|TC58217 homologue to UniRef100_A7PP67 Cluster: Chromoso... 82 4e-15
gnl|LJGI|GO027142 homologue to UniRef100_A7PP67 Cluster: Chromos... 66 2e-10
>gnl|LJGI|TC57912 homologue to UniRef100_Q45W76 Cluster: Ubiquitin-conjugating enzyme
2; n=1; Arachis hypogaea|Rep: Ubiquitin-conjugating
enzyme 2 - Arachis hypogaea (Peanut), complete
Length = 817
Score = 952 bits (480), Expect = 0.0
Identities = 480/480 (100%)
Strand = Plus / Plus
Query: 1 atgggctccgaaggatccagtgtcgtcgttcctaggagtttcagattattggaagagctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94 atgggctccgaaggatccagtgtcgtcgttcctaggagtttcagattattggaagagctt 153
Query: 61 gagcgaggtgagaagggaattggagatggaactgtaagctatggaatggacgacgctgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 gagcgaggtgagaagggaattggagatggaactgtaagctatggaatggacgacgctgat 213
Query: 121 gatatatacatgcagtcatggactggaacaattatcggcccccctggtactgttcatgaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 gatatatacatgcagtcatggactggaacaattatcggcccccctggtactgttcatgaa 273
Query: 181 ggtcgtatctatcagttgaaactgttttgtggcaaggactatccagataatccaccatca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 ggtcgtatctatcagttgaaactgttttgtggcaaggactatccagataatccaccatca 333
Query: 241 gttagatttcagacaaggattaacatcacttgtgtcaaccaagaaactggagctgttgat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 gttagatttcagacaaggattaacatcacttgtgtcaaccaagaaactggagctgttgat 393
Query: 301 ccacattcatttcccatgcttgctaattggcaaagagagtgtacaatggaagacattttg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 ccacattcatttcccatgcttgctaattggcaaagagagtgtacaatggaagacattttg 453
Query: 361 atgcaattgaagaaagaaatgatgtctccacaaaaccggaagctagcccaaccagctgaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 atgcaattgaagaaagaaatgatgtctccacaaaaccggaagctagcccaaccagctgaa 513
Query: 421 ggcaacgaagatggcaggattgaacaaaaggggctggtcctgagatgttgtgtcatgtaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 ggcaacgaagatggcaggattgaacaaaaggggctggtcctgagatgttgtgtcatgtaa 573
>gnl|LJGI|TC71623 homologue to UniRef100_A7PP67 Cluster: Chromosome chr8 scaffold_23,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_23, whole genome shotgun
sequence - Vitis vinifera (Grape), complete
Length = 983
Score = 81.8 bits (41), Expect = 4e-15
Identities = 122/149 (81%)
Strand = Plus / Plus
Query: 79 attggagatggaactgtaagctatggaatggacgacgctgatgatatatacatgcagtca 138
||||||||||| || ||||||||||||||||| |||| |||||| || ||||||| ||
Sbjct: 225 attggagatggcacagtaagctatggaatggatgacggtgatgacatttacatgcgctct 284
Query: 139 tggactggaacaattatcggcccccctggtactgttcatgaaggtcgtatctatcagttg 198
|||||||| || || || ||||||| | |||||| |||||||| | || ||||| ||
Sbjct: 285 tggactggcaccatcattggcccccataatactgtacatgaaggaagaatttatcaactg 344
Query: 199 aaactgttttgtggcaaggactatccaga 227
|| |||||||||| || |||||||||||
Sbjct: 345 aagctgttttgtgataaagactatccaga 373
>gnl|LJGI|TC58217 homologue to UniRef100_A7PP67 Cluster: Chromosome chr8 scaffold_23,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_23, whole genome shotgun
sequence - Vitis vinifera (Grape), complete
Length = 834
Score = 81.8 bits (41), Expect = 4e-15
Identities = 122/149 (81%)
Strand = Plus / Plus
Query: 79 attggagatggaactgtaagctatggaatggacgacgctgatgatatatacatgcagtca 138
||||||||||| || ||||||||||||||||| |||| |||||| || ||||||| ||
Sbjct: 244 attggagatggcacagtaagctatggaatggatgacggtgatgacatttacatgcgctct 303
Query: 139 tggactggaacaattatcggcccccctggtactgttcatgaaggtcgtatctatcagttg 198
|||||||| || || || ||||||| | |||||| |||||||| | || ||||| ||
Sbjct: 304 tggactggcaccatcattggcccccataatactgtacatgaaggaagaatttatcaactg 363
Query: 199 aaactgttttgtggcaaggactatccaga 227
|| |||||||||| || |||||||||||
Sbjct: 364 aagctgttttgtgataaagactatccaga 392
>gnl|LJGI|GO027142 homologue to UniRef100_A7PP67 Cluster: Chromosome chr8 scaffold_23,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_23, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (71%)
Length = 670
Score = 65.9 bits (33), Expect = 2e-10
Identities = 72/85 (84%)
Strand = Plus / Minus
Query: 79 attggagatggaactgtaagctatggaatggacgacgctgatgatatatacatgcagtca 138
||||||||||| || ||||||||||||||||| |||| |||||| || ||||||| ||
Sbjct: 417 attggagatggcacagtaagctatggaatggatgacggtgatgacatttacatgcgctct 358
Query: 139 tggactggaacaattatcggccccc 163
|||||||| || || || |||||||
Sbjct: 357 tggactggcaccatcattggccccc 333