Miyakogusa Predicted Gene
- Lj4g3v3112900.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v3112900.1 tr|B3H4G3|B3H4G3_ARATH Protein TIFY 6A
OS=Arabidopsis thaliana GN=JAZ4 PE=4 SV=1,34.58,9e-19,TIFY,Tify; no
description,Tify; seg,NULL; tify,Tify; CCT_2,CO/COL/TOC1, conserved
site,CUFF.52351.1
(987 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC64164 similar to UniRef100_A7P3T6 Cluster: Chromosome... 1132 0.0
gnl|LJGI|TC60107 similar to UniRef100_A7P3T6 Cluster: Chromosome... 1102 0.0
gnl|LJGI|TC73590 similar to UniRef100_A7P3T6 Cluster: Chromosome... 678 0.0
gnl|LJGI|TC67746 similar to UniRef100_A7P3T6 Cluster: Chromosome... 660 0.0
>gnl|LJGI|TC64164 similar to UniRef100_A7P3T6 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (40%)
Length = 830
Score = 1132 bits (571), Expect = 0.0
Identities = 588/594 (98%), Gaps = 6/594 (1%)
Strand = Plus / Plus
Query: 400 ctcgggggaaaacctgttaccgcacctcattcatctcttcccaccattggtgctgttgct 459
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctcgggggaaaacctgttaccgcacctcattcatctcttcccaccattggtgctgttgct 60
Query: 460 ggaatgtctgaatcatgt------ctgaaaacatctgcgccttctgccccacttaccatc 513
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggaatgtctgaatcatgtaacagtctgaaaacatctgcgccttctgccccacttaccatc 120
Query: 514 ttctatgcgggtactgtcaatgtctttgatgatatctctgccgagaaggcacaagcaatc 573
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttctatgcgggtactgtcaatgtctttgatgatatctctgccgagaaggcacaagcaatc 180
Query: 574 atgttgttggcggctggcaatgtcttattcggggcttctagcacggcacagcaaaaagtt 633
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atgttgttggcggctggcaatgtcttattcggggcttctagcacggcacagcaaaaagtt 240
Query: 634 caggcaccgagctctaagttggctggtggtgatgtctgtccgcctgcaaatacaccaccc 693
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 caggcaccgagctctaagttggctggtggtgatgtctgtccgcctgcaaatacaccaccc 300
Query: 694 tgctctggtctttcaagtcctttgtctgtttcgtcccctaccggtgcacattcagggagt 753
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgctctggtctttcaagtcctttgtctgtttcgtcccctaccggtgcacattcagggagt 360
Query: 754 ggctcaactagcactgatgaatttctggcagcgaaaacaactggagttcctactgctcct 813
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggctcaactagcactgatgaatttctggcagcgaaaacaactggagttcctactgctcct 420
Query: 814 gttagcattgtggagccgcgaaaagcagtcaccgcggccactatgttaacatcagcggtg 873
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gttagcattgtggagccgcgaaaagcagtcaccgcggccactatgttaacatcagcggtg 480
Query: 874 cctcaagctcggaaagcatccttggctcgatttttagaaaagcgcaaggaaagggcgatg 933
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cctcaagctcggaaagcatccttggctcgatttttagaaaagcgcaaggaaagggcgatg 540
Query: 934 aatgcagcaccatacaataacctcaagaagtctgaggagtgtgccaatgcataa 987
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aatgcagcaccatacaataacctcaagaagtctgaggagtgtgccaatgcataa 594
>gnl|LJGI|TC60107 similar to UniRef100_A7P3T6 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (35%)
Length = 736
Score = 1102 bits (556), Expect = 0.0
Identities = 556/556 (100%)
Strand = Plus / Plus
Query: 1 atggagagagatttcatgggtctgagctccaaagaaccactctctgtcatcaaggaagaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atggagagagatttcatgggtctgagctccaaagaaccactctctgtcatcaaggaagaa 240
Query: 61 atcaaaaatgatgggtggatagactcaggtttcacgaagggttcggttgcacaatggccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atcaaaaatgatgggtggatagactcaggtttcacgaagggttcggttgcacaatggccc 300
Query: 121 ttcacgaacaaagtgtctgcttttccccatgtgatgtctttcaaggtttctcaagatgaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttcacgaacaaagtgtctgcttttccccatgtgatgtctttcaaggtttctcaagatgaa 360
Query: 181 aggactaaaaggatggtgtctgaaccccagaaatctctcaatctcaacgagcaaggcggc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aggactaaaaggatggtgtctgaaccccagaaatctctcaatctcaacgagcaaggcggc 420
Query: 241 attcatttttcactggcgccgcatccggtacaacatgatgggaagatgttttcagtttcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 attcatttttcactggcgccgcatccggtacaacatgatgggaagatgttttcagtttcc 480
Query: 301 aatcaagcaatttctgcccccttgggaaacccattccagaagaatcattttgccgctgct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aatcaagcaatttctgcccccttgggaaacccattccagaagaatcattttgccgctgct 540
Query: 361 ggtcagaatatgaacggtgctaatgtaaaactgccacttctcgggggaaaacctgttacc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ggtcagaatatgaacggtgctaatgtaaaactgccacttctcgggggaaaacctgttacc 600
Query: 421 gcacctcattcatctcttcccaccattggtgctgttgctggaatgtctgaatcatgtctg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gcacctcattcatctcttcccaccattggtgctgttgctggaatgtctgaatcatgtctg 660
Query: 481 aaaacatctgcgccttctgccccacttaccatcttctatgcgggtactgtcaatgtcttt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 aaaacatctgcgccttctgccccacttaccatcttctatgcgggtactgtcaatgtcttt 720
Query: 541 gatgatatctctgccg 556
||||||||||||||||
Sbjct: 721 gatgatatctctgccg 736
>gnl|LJGI|TC73590 similar to UniRef100_A7P3T6 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (29%)
Length = 834
Score = 678 bits (342), Expect = 0.0
Identities = 345/346 (99%)
Strand = Plus / Plus
Query: 642 gagctctaagttggctggtggtgatgtctgtccgcctgcaaatacaccaccctgctctgg 701
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 gagctctaagttggctggtggtgatgtctgtccgcctgcaaatacaccaccctgctctgg 342
Query: 702 tctttcaagtcctttgtctgtttcgtcccctaccggtgcacattcagggagtggctcaac 761
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 tctttcaagtcctttgtctgtttcgtcccctaccggtgcacattcagggagtggctcaac 402
Query: 762 tagcactgatgaatttctggcagcgaaaacaactggagttcctactgctcctgttagcat 821
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 tagcactgatgaatttctggcagcgaaaacaactggagttcctactgctcctgttagcat 462
Query: 822 tgtggagccgcgaaaagcagtcaccgcggccactatgttaacatcagcggtgcctcaagc 881
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 tgtggagccgcgaaaagcagtcaccgcggccactatgttaacatcagcggtgcctcaagc 522
Query: 882 tcggaaagcatccttggctcgatttttagaaaagcgcaaggaaagggcgatgaatgcagc 941
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 tcggaaagcacccttggctcgatttttagaaaagcgcaaggaaagggcgatgaatgcagc 582
Query: 942 accatacaataacctcaagaagtctgaggagtgtgccaatgcataa 987
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 accatacaataacctcaagaagtctgaggagtgtgccaatgcataa 628
Score = 365 bits (184), Expect = e-100
Identities = 184/184 (100%)
Strand = Plus / Plus
Query: 1 atggagagagatttcatgggtctgagctccaaagaaccactctctgtcatcaaggaagaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101 atggagagagatttcatgggtctgagctccaaagaaccactctctgtcatcaaggaagaa 160
Query: 61 atcaaaaatgatgggtggatagactcaggtttcacgaagggttcggttgcacaatggccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 atcaaaaatgatgggtggatagactcaggtttcacgaagggttcggttgcacaatggccc 220
Query: 121 ttcacgaacaaagtgtctgcttttccccatgtgatgtctttcaaggtttctcaagatgaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 ttcacgaacaaagtgtctgcttttccccatgtgatgtctttcaaggtttctcaagatgaa 280
Query: 181 agga 184
||||
Sbjct: 281 agga 284
>gnl|LJGI|TC67746 similar to UniRef100_A7P3T6 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (42%)
Length = 946
Score = 660 bits (333), Expect = 0.0
Identities = 333/333 (100%)
Strand = Plus / Plus
Query: 291 ttcagtttccaatcaagcaatttctgcccccttgggaaacccattccagaagaatcattt 350
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 176 ttcagtttccaatcaagcaatttctgcccccttgggaaacccattccagaagaatcattt 235
Query: 351 tgccgctgctggtcagaatatgaacggtgctaatgtaaaactgccacttctcgggggaaa 410
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 236 tgccgctgctggtcagaatatgaacggtgctaatgtaaaactgccacttctcgggggaaa 295
Query: 411 acctgttaccgcacctcattcatctcttcccaccattggtgctgttgctggaatgtctga 470
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 acctgttaccgcacctcattcatctcttcccaccattggtgctgttgctggaatgtctga 355
Query: 471 atcatgtctgaaaacatctgcgccttctgccccacttaccatcttctatgcgggtactgt 530
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 atcatgtctgaaaacatctgcgccttctgccccacttaccatcttctatgcgggtactgt 415
Query: 531 caatgtctttgatgatatctctgccgagaaggcacaagcaatcatgttgttggcggctgg 590
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 caatgtctttgatgatatctctgccgagaaggcacaagcaatcatgttgttggcggctgg 475
Query: 591 caatgtcttattcggggcttctagcacggcaca 623
|||||||||||||||||||||||||||||||||
Sbjct: 476 caatgtcttattcggggcttctagcacggcaca 508
Score = 486 bits (245), Expect = e-136
Identities = 248/249 (99%)
Strand = Plus / Plus
Query: 739 gcacattcagggagtggctcaactagcactgatgaatttctggcagcgaaaacaactgga 798
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gcacattcagggagtggctcaactagcactgatgaatttctggcagcgaaaacaactgga 563
Query: 799 gttcctactgctcctgttagcattgtggagccgcgaaaagcagtcaccgcggccactatg 858
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gttcctactgctcctgttagcattgtggagccgcgaaaagcagtcaccgcggccactatg 623
Query: 859 ttaacatcagcggtgcctcaagctcggaaagcatccttggctcgatttttagaaaagcgc 918
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 624 ttaacatcagcggtgcctcaagctcggaaagcatcctcggctcgatttttagaaaagcgc 683
Query: 919 aaggaaagggcgatgaatgcagcaccatacaataacctcaagaagtctgaggagtgtgcc 978
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 aaggaaagggcgatgaatgcagcaccatacaataacctcaagaagtctgaggagtgtgcc 743
Query: 979 aatgcataa 987
|||||||||
Sbjct: 744 aatgcataa 752
Score = 91.7 bits (46), Expect = 8e-18
Identities = 46/46 (100%)
Strand = Plus / Plus
Query: 591 caatgtcttattcggggcttctagcacggcacagcaaaaagttcag 636
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 caatgtcttattcggggcttctagcacggcacagcaaaaagttcag 180