Miyakogusa Predicted Gene
- Lj4g3v3112880.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v3112880.1 tr|B9HJE6|B9HJE6_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_766170 PE=4
SV=1,45.95,1e-18,F-box,F-box domain, cyclin-like; no description,NULL;
FBOX,F-box domain, cyclin-like; seg,NULL; PUTA,CUFF.52303.1
(969 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59531 weakly similar to UniRef100_A7P3T3 Cluster: Chr... 1921 0.0
gnl|LJGI|GO024790 weakly similar to UniRef100_A7P3T3 Cluster: Ch... 1166 0.0
>gnl|LJGI|TC59531 weakly similar to UniRef100_A7P3T3 Cluster: Chromosome chr1
scaffold_5, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr1 scaffold_5, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (59%)
Length = 1130
Score = 1921 bits (969), Expect = 0.0
Identities = 969/969 (100%)
Strand = Plus / Plus
Query: 1 atggaagagtcttccaaggctttctcctctctaagcatcacagttgaaaaaggccaagca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68 atggaagagtcttccaaggctttctcctctctaagcatcacagttgaaaaaggccaagca 127
Query: 61 caaacagaacaagaacctcctcatgaagccttgtttcttgtcttaacataccttccagtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 caaacagaacaagaacctcctcatgaagccttgtttcttgtcttaacataccttccagtg 187
Query: 121 taccaggttctagccatgtctcaggtttgcaaagcactaagggatgcagttaacaatgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 taccaggttctagccatgtctcaggtttgcaaagcactaagggatgcagttaacaatgat 247
Query: 181 gtgttgccatggctgaatgttattgttgaaaggcctctgagttcaaggctctctgatgag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 gtgttgccatggctgaatgttattgttgaaaggcctctgagttcaaggctctctgatgag 307
Query: 241 attctagtgaaaatcacttccaaggccaatggaaggctcaaaactctggctttgatgaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 attctagtgaaaatcacttccaaggccaatggaaggctcaaaactctggctttgatgaac 367
Query: 301 tgcacccacatcactgacaaggggctccaaagggtcgttgaacaaaaccccctcatcaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 tgcacccacatcactgacaaggggctccaaagggtcgttgaacaaaaccccctcatcaac 427
Query: 361 aagctgcatataccagcatgcaccggcataaccgctgaaggagttacaagagcagtgcaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 aagctgcatataccagcatgcaccggcataaccgctgaaggagttacaagagcagtgcaa 487
Query: 421 acattgtgccaaagaagcaactgcttaagcacattacgcataaacggcatctacaaccta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 acattgtgccaaagaagcaactgcttaagcacattacgcataaacggcatctacaaccta 547
Query: 481 cagaaggagcatctagacatgcttgccatgaacctcagaaagaacgttccattagaggag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cagaaggagcatctagacatgcttgccatgaacctcagaaagaacgttccattagaggag 607
Query: 541 cagcaaatgcagaagcctaactactatcataaacgcggaagctttacagtgtttagccgc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 cagcaaatgcagaagcctaactactatcataaacgcggaagctttacagtgtttagccgc 667
Query: 601 gaagaaaaccagaggattattgatttggagacatgtcccaagtgctttgaggtgacgatg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 gaagaaaaccagaggattattgatttggagacatgtcccaagtgctttgaggtgacgatg 727
Query: 661 gtctatgactgtccaaaagtggaatgcatgaagagggaaaagccccaagttcaatgtagg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 gtctatgactgtccaaaagtggaatgcatgaagagggaaaagccccaagttcaatgtagg 787
Query: 721 ggatgcaaattttgtattccaaggtgtgaaaactgtggtggatgtgttggatctgaagaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 788 ggatgcaaattttgtattccaaggtgtgaaaactgtggtggatgtgttggatctgaagaa 847
Query: 781 gaggaagaagctgcatgtgcagatatcttgtgccttgaatgttggttgcagcttcccaag 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 848 gaggaagaagctgcatgtgcagatatcttgtgccttgaatgttggttgcagcttcccaag 907
Query: 841 tgtaatttctgtaataaaccatattgtaaacaacatgaaaattggtggtgctcttcctta 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 908 tgtaatttctgtaataaaccatattgtaaacaacatgaaaattggtggtgctcttcctta 967
Query: 901 gaccctatattcctctgcagagtttgtgatgaacattctcatggatatacatacactgat 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 968 gaccctatattcctctgcagagtttgtgatgaacattctcatggatatacatacactgat 1027
Query: 961 gttctatag 969
|||||||||
Sbjct: 1028 gttctatag 1036
>gnl|LJGI|GO024790 weakly similar to UniRef100_A7P3T3 Cluster: Chromosome chr1
scaffold_5, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr1 scaffold_5, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (34%)
Length = 671
Score = 1166 bits (588), Expect = 0.0
Identities = 588/588 (100%)
Strand = Plus / Plus
Query: 278 tcaaaactctggctttgatgaactgcacccacatcactgacaaggggctccaaagggtcg 337
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84 tcaaaactctggctttgatgaactgcacccacatcactgacaaggggctccaaagggtcg 143
Query: 338 ttgaacaaaaccccctcatcaacaagctgcatataccagcatgcaccggcataaccgctg 397
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 ttgaacaaaaccccctcatcaacaagctgcatataccagcatgcaccggcataaccgctg 203
Query: 398 aaggagttacaagagcagtgcaaacattgtgccaaagaagcaactgcttaagcacattac 457
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 aaggagttacaagagcagtgcaaacattgtgccaaagaagcaactgcttaagcacattac 263
Query: 458 gcataaacggcatctacaacctacagaaggagcatctagacatgcttgccatgaacctca 517
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gcataaacggcatctacaacctacagaaggagcatctagacatgcttgccatgaacctca 323
Query: 518 gaaagaacgttccattagaggagcagcaaatgcagaagcctaactactatcataaacgcg 577
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gaaagaacgttccattagaggagcagcaaatgcagaagcctaactactatcataaacgcg 383
Query: 578 gaagctttacagtgtttagccgcgaagaaaaccagaggattattgatttggagacatgtc 637
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gaagctttacagtgtttagccgcgaagaaaaccagaggattattgatttggagacatgtc 443
Query: 638 ccaagtgctttgaggtgacgatggtctatgactgtccaaaagtggaatgcatgaagaggg 697
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ccaagtgctttgaggtgacgatggtctatgactgtccaaaagtggaatgcatgaagaggg 503
Query: 698 aaaagccccaagttcaatgtaggggatgcaaattttgtattccaaggtgtgaaaactgtg 757
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 aaaagccccaagttcaatgtaggggatgcaaattttgtattccaaggtgtgaaaactgtg 563
Query: 758 gtggatgtgttggatctgaagaagaggaagaagctgcatgtgcagatatcttgtgccttg 817
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gtggatgtgttggatctgaagaagaggaagaagctgcatgtgcagatatcttgtgccttg 623
Query: 818 aatgttggttgcagcttcccaagtgtaatttctgtaataaaccatatt 865
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 aatgttggttgcagcttcccaagtgtaatttctgtaataaaccatatt 671