Miyakogusa Predicted Gene
- Lj4g3v3112870.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v3112870.2 CUFF.52334.2
(446 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC68141 similar to UniRef100_A7P3T2 Cluster: Chromosome... 141 4e-33
gnl|LJGI|TC79865 137 7e-32
gnl|LJGI|BW594422 similar to UniRef100_A7P3T2 Cluster: Chromosom... 96 2e-19
gnl|LJGI|DC595186 similar to UniRef100_UPI0000660CE7 Cluster: NE... 66 2e-10
>gnl|LJGI|TC68141 similar to UniRef100_A7P3T2 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (93%)
Length = 1445
Score = 141 bits (71), Expect = 4e-33
Identities = 130/149 (87%), Gaps = 8/149 (5%)
Strand = Plus / Plus
Query: 177 attaaaagaaacaatccaataccaaacccatcaaagatgtacaccatgggaaaatcacac 236
|||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||| |
Sbjct: 303 attaaaagaaacaatccaataccaaacccaacaaggatgtacaccatggtaaaatcaaag 362
Query: 237 t--aggcaaaataaacgtggagaatcacaaaagctaaaggaagttacttctgctactgcg 294
| ||||||||||| ||| | | ||||||||||||||||||||||||| ||| |
Sbjct: 363 tgaaggcaaaataacggtgaacagtcacaaaagctaaaggaagttactt------ctgtg 416
Query: 295 attttgaccgaacatgcatacatattgta 323
|||||||||||||||||||||||||||||
Sbjct: 417 attttgaccgaacatgcatacatattgta 445
Score = 69.9 bits (35), Expect = 1e-11
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 408 cccccttcgaaagccaatggagtgcaaaagatattagcc 446
||||||| |||||||||||||||||||||||||||||||
Sbjct: 544 ccccctttgaaagccaatggagtgcaaaagatattagcc 582
>gnl|LJGI|TC79865
Length = 635
Score = 137 bits (69), Expect = 7e-32
Identities = 69/69 (100%)
Strand = Plus / Plus
Query: 1 atgttcccccttggcaggttttatcaatgtttagcaaaggaaagtggaatcttttatgca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 atgttcccccttggcaggttttatcaatgtttagcaaaggaaagtggaatcttttatgca 626
Query: 61 atttgtttg 69
|||||||||
Sbjct: 627 atttgtttg 635
>gnl|LJGI|BW594422 similar to UniRef100_A7P3T2 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (42%)
Length = 480
Score = 95.6 bits (48), Expect = 2e-19
Identities = 48/48 (100%)
Strand = Plus / Plus
Query: 399 acattcggccccccttcgaaagccaatggagtgcaaaagatattagcc 446
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117 acattcggccccccttcgaaagccaatggagtgcaaaagatattagcc 164
Score = 75.8 bits (38), Expect = 2e-13
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 286 gctactgcgattttgaccgaacatgcatacatattgta 323
||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gctactgcgattttgaccgaacatgcatacatattgta 39
>gnl|LJGI|DC595186 similar to UniRef100_UPI0000660CE7 Cluster: NEDD4-binding protein 1
(N4BP1); n=1; Takifugu rubripes|Rep: NEDD4-binding
protein 1 (N4BP1) - Takifugu rubripes, partial (3%)
Length = 984
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 399 acattcggccccccttcgaaagccaatggagtgcaaaagatatta 443
||||||||||||||||| ||||||| |||||||||||| ||||||
Sbjct: 107 acattcggccccccttccaaagccactggagtgcaaaaaatatta 151