Miyakogusa Predicted Gene
- Lj4g3v3099480.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v3099480.1 Non Chatacterized Hit- tr|A5BFD4|A5BFD4_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,34.95,4e-18,DISEASERSIST,Disease resistance protein; seg,NULL; L
domain-like,NULL; "Winged helix" DNA-binding
do,NODE_67563_length_2836_cov_8.740127.path2.1
(1737 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO025974 weakly similar to UniRef100_Q3IA99 Cluster: Di... 1096 0.0
gnl|LJGI|TC79632 weakly similar to UniRef100_Q3IA99 Cluster: Dis... 934 0.0
gnl|LJGI|TC62701 similar to UniRef100_A3CYW8 Cluster: Protoheme ... 182 5e-45
gnl|LJGI|GO004933 weakly similar to UniRef100_Q3IA99 Cluster: Di... 174 1e-42
gnl|LJGI|TC82468 weakly similar to UniRef100_Q3IA99 Cluster: Dis... 103 4e-21
>gnl|LJGI|GO025974 weakly similar to UniRef100_Q3IA99 Cluster: Disease resistance
protein; n=1; Phaseolus vulgaris|Rep: Disease resistance
protein - Phaseolus vulgaris (Kidney bean) (French
bean), partial (20%)
Length = 676
Score = 1096 bits (553), Expect = 0.0
Identities = 553/553 (100%)
Strand = Plus / Plus
Query: 1 atgcaggtgtttaggaatgctggagctgatgaaacatatgaagtcaagaagatggattac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 atgcaggtgtttaggaatgctggagctgatgaaacatatgaagtcaagaagatggattac 183
Query: 61 caagattctctacagctcttcagtttaaattcctttaaacaaatctttcccgtgaagagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 caagattctctacagctcttcagtttaaattcctttaaacaaatctttcccgtgaagagt 243
Query: 121 tatgcagacttggtagaaaaggtattacaatatgctcaaggggttccattagctctcaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 tatgcagacttggtagaaaaggtattacaatatgctcaaggggttccattagctctcaaa 303
Query: 181 gttttaggctcactgctttgtggtcaagagatgaaaacatgggaagatgagttggaaaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 gttttaggctcactgctttgtggtcaagagatgaaaacatgggaagatgagttggaaaag 363
Query: 241 ttgaaagtgcttcccaatgttgatatttttaatgtgttgatattaagttacgagggcttg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 ttgaaagtgcttcccaatgttgatatttttaatgtgttgatattaagttacgagggcttg 423
Query: 301 gaccgtttgcagaaggacatatttcttgacatagcttgctttcatgcaggcagttttgtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 gaccgtttgcagaaggacatatttcttgacatagcttgctttcatgcaggcagttttgtg 483
Query: 361 aatagagtagtggaattgctagatagttgtggtttcaaggctgaaagtgcaatgagattc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 aatagagtagtggaattgctagatagttgtggtttcaaggctgaaagtgcaatgagattc 543
Query: 421 ctcaaagataggtgccttatatctattttgggagatcgagtcatggtgcatgatctaata 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 ctcaaagataggtgccttatatctattttgggagatcgagtcatggtgcatgatctaata 603
Query: 481 ctggaaatgggaaaagaaattgtttgtcgacaatgtgtccatgatcctagagaacgcagt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 ctggaaatgggaaaagaaattgtttgtcgacaatgtgtccatgatcctagagaacgcagt 663
Query: 541 cgtttatggaacc 553
|||||||||||||
Sbjct: 664 cgtttatggaacc 676
>gnl|LJGI|TC79632 weakly similar to UniRef100_Q3IA99 Cluster: Disease resistance
protein; n=1; Phaseolus vulgaris|Rep: Disease resistance
protein - Phaseolus vulgaris (Kidney bean) (French bean),
partial (18%)
Length = 487
Score = 934 bits (471), Expect = 0.0
Identities = 477/479 (99%)
Strand = Plus / Plus
Query: 954 tcgaataccagacctttctaagtctccaaatattgaagaaataattctctctagttgtga 1013
||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 9 tcgaataccagacctttctaagtctccaaatatcgtagaaataattctctctagttgtga 68
Query: 1014 atcccttacaagccttccaatcgacctttgtaagttgaaatcgcttagaagacttgatct 1073
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 atcccttacaagccttccaatcgacctttgtaagttgaaatcgcttagaagacttgatct 128
Query: 1074 gaattgttgcaaaaatttggaaaaattccctgaaatcatggagacaatggaacatttagc 1133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 gaattgttgcaaaaatttggaaaaattccctgaaatcatggagacaatggaacatttagc 188
Query: 1134 tgtgcttatcttaggcgaaacagcaattcaagcactacctgcatccttgcaccttttggt 1193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 tgtgcttatcttaggcgaaacagcaattcaagcactacctgcatccttgcaccttttggt 248
Query: 1194 ggggcttggagaattgagcttgatgttttgctcaaagcttgagattattccaaacagcat 1253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 ggggcttggagaattgagcttgatgttttgctcaaagcttgagattattccaaacagcat 308
Query: 1254 ttgtaatctaaagcttctctctaagcttgactgttcaggctgtggtaaattaacaggaat 1313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 ttgtaatctaaagcttctctctaagcttgactgttcaggctgtggtaaattaacaggaat 368
Query: 1314 accagatgacataggtcgcatgctatcattaaggaaattgtcactgcaaggcaccaaaat 1373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 accagatgacataggtcgcatgctatcattaaggaaattgtcactgcaaggcaccaaaat 428
Query: 1374 cgtgaaccttccagatagtattgctcatctttcaagcttggaatcacttaatgtaagtg 1432
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 cgtgaaccttccagatagtattgctcatctttcaagcttggaatcacttaatgtaagtg 487
>gnl|LJGI|TC62701 similar to UniRef100_A3CYW8 Cluster: Protoheme IX farnesyltransferase
precursor; n=2; Shewanella baltica|Rep: Protoheme IX
farnesyltransferase precursor - Shewanella baltica
(strain OS155 / ATCC BAA-1091), partial (7%)
Length = 881
Score = 182 bits (92), Expect = 5e-45
Identities = 182/212 (85%)
Strand = Plus / Plus
Query: 1526 acccatcagataccaaagagggtaccttcgaatttcatttaaccaataatgatgaacagg 1585
|||| |||||| ||||||| ||||| ||| |||||||||| |||| |||||| || ||||
Sbjct: 34 acccttcagattccaaagaaggtactttccaatttcatttcaccagtaatgaagatcagg 93
Query: 1586 atctaagggctcatggtgatgttgtggccgatgcaaggaataggatcattgaggatgcat 1645
||| ||| ||| | ||||||||||||||||||||||| || | |||| ||||||||||
Sbjct: 94 atccaagtgcttgtagtgatgttgtggccgatgcaaggcttaaggtcatagaggatgcat 153
Query: 1646 ctaggtttgtgtactattgctttccagggagtgcagttcctgattggttctcttatcgtg 1705
||| ||||||||||||||||||||||||||||| ||||| |||||||| |||||||
Sbjct: 154 atagatttgtgtactattgctttccagggagtgcggttccatattggttcccttatcgat 213
Query: 1706 gcgcgggaaattcagtaactgtggattaagat 1737
||| |||| ||||||||||||||||| |||||
Sbjct: 214 gcgagggagattcagtaactgtggataaagat 245
>gnl|LJGI|GO004933 weakly similar to UniRef100_Q3IA99 Cluster: Disease resistance
protein; n=1; Phaseolus vulgaris|Rep: Disease resistance
protein - Phaseolus vulgaris (Kidney bean) (French bean),
partial (9%)
Length = 651
Score = 174 bits (88), Expect = 1e-42
Identities = 130/144 (90%)
Strand = Plus / Plus
Query: 1375 gtgaaccttccagatagtattgctcatctttcaagcttggaatcacttaatgtaagtgat 1434
|||||||||||||| ||||||||||||||||||| |||| ||||||||||||| |||| |
Sbjct: 391 gtgaaccttccagagagtattgctcatctttcaaccttgaaatcacttaatgtcagtggt 450
Query: 1435 tgcaaaaagcttgtctttatcccacaacttccaccatttttgaaagagttattggcattt 1494
|||| |||||||| | ||||||| |||||||||||||| ||||| |||||||||||||
Sbjct: 451 tgcagaaagcttgaatgtatcccaaaacttccaccatttctgaaatggttattggcattt 510
Query: 1495 gattgcccatccataacaagagtg 1518
|||||||||||||| |||||||||
Sbjct: 511 gattgcccatccattacaagagtg 534
Score = 165 bits (83), Expect = 1e-39
Identities = 164/191 (85%)
Strand = Plus / Plus
Query: 1241 ttccaaacagcatttgtaatctaaagcttctctctaagcttgactgttcaggctgtggta 1300
|||||||||||||||| |||||||||||||| |||||||||||||||||||| ||| | |
Sbjct: 50 ttccaaacagcatttgcaatctaaagcttctatctaagcttgactgttcaggttgtcgca 109
Query: 1301 aattaacaggaataccagatgacataggtcgcatgctatcattaaggaaattgtcactgc 1360
| ||||||| ||| ||| ||||||| || ||| || |||||||||||| ||| |||||
Sbjct: 110 acttaacagaaatcccaaatgacattggccgcttgtcatcattaaggaacttgcaactgc 169
Query: 1361 aaggcaccaaaatcgtgaaccttccagatagtattgctcatctttcaagcttggaatcac 1420
| | |||||||| |||||| | ||||| || |||| |||||||||||||||||||||||
Sbjct: 170 atcgtaccaaaattgtgaacttcccagagagcattggtcatctttcaagcttggaatcac 229
Query: 1421 ttaatgtaagt 1431
|||||| ||||
Sbjct: 230 ttaatgcaagt 240
Score = 89.7 bits (45), Expect = 5e-17
Identities = 54/57 (94%)
Strand = Plus / Plus
Query: 1375 gtgaaccttccagatagtattgctcatctttcaagcttggaatcacttaatgtaagt 1431
|||||||||||||| |||||||||||||||||||||||| | |||||||||||||||
Sbjct: 253 gtgaaccttccagagagtattgctcatctttcaagcttgaactcacttaatgtaagt 309
Score = 75.8 bits (38), Expect = 8e-13
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 1370 aaatcgtgaaccttccagatagtattgctcatctttcaagcttggaatcacttaatgtaa 1429
|||| |||||||||||||| || || | |||||||||||||||| |||||||||||||||
Sbjct: 317 aaattgtgaaccttccagagagcatgggtcatctttcaagcttgaaatcacttaatgtaa 376
Query: 1430 gt 1431
||
Sbjct: 377 gt 378
>gnl|LJGI|TC82468 weakly similar to UniRef100_Q3IA99 Cluster: Disease resistance
protein; n=1; Phaseolus vulgaris|Rep: Disease resistance
protein - Phaseolus vulgaris (Kidney bean) (French
bean), partial (21%)
Length = 918
Score = 103 bits (52), Expect = 4e-21
Identities = 112/132 (84%)
Strand = Plus / Plus
Query: 421 ctcaaagataggtgccttatatctattttgggagatcgagtcatggtgcatgatctaata 480
|||||||||||||| ||||| |||||||||| || | || || || ||||||||||||||
Sbjct: 397 ctcaaagataggtgtcttatttctattttggaaggtagaatcgtgatgcatgatctaata 456
Query: 481 ctggaaatgggaaaagaaattgtttgtcgacaatgtgtccatgatcctagagaacgcagt 540
|| ||||||||||||||| ||| ||| ||||||| | |||||||| || ||||||||
Sbjct: 457 gaggtaatgggaaaagaaatagttcgtcaacaatgtcccaatgatcctggaaaacgcagt 516
Query: 541 cgtttatggaac 552
|| |||||||||
Sbjct: 517 cgattatggaac 528
Score = 95.6 bits (48), Expect = 9e-19
Identities = 129/152 (84%), Gaps = 3/152 (1%)
Strand = Plus / Plus
Query: 788 ttcttcattgggatgaatttcctcaaagatctttgccgctggacttttgcccagaaaatc 847
|||||| |||||||| |||||| | ||||| ||| |||||||||||||| ||| ||||||
Sbjct: 753 ttcttcgttgggatggatttcccctaagatattttccgctggacttttgtccacaaaatc 812
Query: 848 ttgttgaacttcgtatgcgccatatccatcttgaacaattttgggagaacgatcaggaat 907
||||| ||||| ||||||| ||| ||||||||||| | |||||||| | ||||||||
Sbjct: 813 ttgttaaacttgatatgcgcgatagccatcttgaac-actttgggaggaagatcaggatc 871
Query: 908 taccaaa-tttgaaaaggc-tcgatcttagta 937
||||||| | ||||||||| | ||||||||||
Sbjct: 872 taccaaactctgaaaaggcatggatcttagta 903
Score = 69.9 bits (35), Expect = 5e-11
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 25 gctgatgaaacatatgaagtcaagaagatggattaccaagattctctacagctcttcagt 84
|||||||||| ||||||||||||| ||||| || ||||||||||||| |||||||||
Sbjct: 1 gctgatgaaatatatgaagtcaaggagatgagttttgaagattctctacaactcttcagt 60
Query: 85 ttaaattcctt 95
|||||| ||||
Sbjct: 61 ttaaatgcctt 71