Miyakogusa Predicted Gene
- Lj4g3v3099330.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v3099330.1 Non Chatacterized Hit- tr|C0JP27|C0JP27_LOTJA
Putative basic helix-loop-helix protein BHLH5
OS=Lotus,98.51,0,HLH,Helix-loop-helix domain; no
description,Helix-loop-helix domain; BASIC HELIX-LOOP-HELIX (BHLH)
F,NODE_58652_length_985_cov_16.006092.path2.1
(807 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC66245 similar to UniRef100_Q8GZ13 Cluster: Protein BE... 1600 0.0
gnl|LJGI|TC71872 similar to UniRef100_Q8GWK7 Cluster: Protein BE... 343 1e-93
gnl|LJGI|AV772495 homologue to UniRef100_A2Q3E9 Cluster: Helix-l... 64 1e-09
gnl|LJGI|TC78089 similar to UniRef100_A7Q723 Cluster: Chromosome... 62 6e-09
gnl|LJGI|TC60285 similar to UniRef100_Q5U8L7 Cluster: BHLH trans... 56 3e-07
gnl|LJGI|TC74742 similar to UniRef100_A7Q723 Cluster: Chromosome... 54 1e-06
>gnl|LJGI|TC66245 similar to UniRef100_Q8GZ13 Cluster: Protein BEE 1; n=1;
Arabidopsis thaliana|Rep: Protein BEE 1 - Arabidopsis
thaliana (Mouse-ear cress), partial (39%)
Length = 998
Score = 1600 bits (807), Expect = 0.0
Identities = 807/807 (100%)
Strand = Plus / Plus
Query: 1 atggctgaattcactgcagattggcaaagtcttagaccctcatcatttcctttcttagat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51 atggctgaattcactgcagattggcaaagtcttagaccctcatcatttcctttcttagat 110
Query: 61 attgataacatggaactactaaatcatctcaaaggggtgaattcacataccttggacaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111 attgataacatggaactactaaatcatctcaaaggggtgaattcacataccttggacaac 170
Query: 121 tcaattttgaacatgcagaacttgatgcaattctccagtggcagcttcttttgctcctca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 tcaattttgaacatgcagaacttgatgcaattctccagtggcagcttcttttgctcctca 230
Query: 181 gaaccagaatttcaaggaaacttggaagaaaatatgccaggccttgtgcatcatttcaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 gaaccagaatttcaaggaaacttggaagaaaatatgccaggccttgtgcatcatttcaat 290
Query: 241 caaaatgcagctccagtttcaccacctatttcttcagtagaaaatgaaggtagaaagagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 caaaatgcagctccagtttcaccacctatttcttcagtagaaaatgaaggtagaaagagg 350
Query: 301 aaagcaaccaacatgagtggacctagttctgcaaattcaaccccttcagtttctgagagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 aaagcaaccaacatgagtggacctagttctgcaaattcaaccccttcagtttctgagagt 410
Query: 361 gaaagcaagatcaaaaattgctctggaagaggcaagagagtaaaaaagaacatgatggaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 gaaagcaagatcaaaaattgctctggaagaggcaagagagtaaaaaagaacatgatggaa 470
Query: 421 gaggaagacaagaaatcaacacaagtagttcatgttagagccagaagaggtcaagctact 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 gaggaagacaagaaatcaacacaagtagttcatgttagagccagaagaggtcaagctact 530
Query: 481 gatagtcacagtttagcagaaagggttagaagaggtaaaatcaatgaaaaacttaagtgc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 gatagtcacagtttagcagaaagggttagaagaggtaaaatcaatgaaaaacttaagtgc 590
Query: 541 ttgcaaaacattgtcccaggatgttacaagactatgggtatggcaataatgttggatgag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 ttgcaaaacattgtcccaggatgttacaagactatgggtatggcaataatgttggatgag 650
Query: 601 atcataaactatgtccagtccttgcaacatcaagtggagttcctctctatgaagctcact 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 atcataaactatgtccagtccttgcaacatcaagtggagttcctctctatgaagctcact 710
Query: 661 gcagcaagcaccttttatgacttcaattcagagataaattctttagaggcaatgcagaga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 gcagcaagcaccttttatgacttcaattcagagataaattctttagaggcaatgcagaga 770
Query: 721 gcaagggtatccgaggcaaaagagttggcaaagtacgtgacagaaggatatgaaggagtt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 771 gcaagggtatccgaggcaaaagagttggcaaagtacgtgacagaaggatatgaaggagtt 830
Query: 781 tcttgctttcaaccaacttggccttaa 807
|||||||||||||||||||||||||||
Sbjct: 831 tcttgctttcaaccaacttggccttaa 857
>gnl|LJGI|TC71872 similar to UniRef100_Q8GWK7 Cluster: Protein BEE 3; n=1;
Arabidopsis thaliana|Rep: Protein BEE 3 - Arabidopsis
thaliana (Mouse-ear cress), partial (41%)
Length = 1161
Score = 343 bits (173), Expect = 1e-93
Identities = 314/361 (86%)
Strand = Plus / Plus
Query: 443 aagtagttcatgttagagccagaagaggtcaagctactgatagtcacagtttagcagaaa 502
|||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 aagtggttcatgtcagagccagaagaggtcaagctactgatagtcacagtttagcagaaa 557
Query: 503 gggttagaagaggtaaaatcaatgaaaaacttaagtgcttgcaaaacattgtcccaggat 562
|||| |||||||| ||||||||||| ||||| | |||||| || |||||||| || ||||
Sbjct: 558 gggtcagaagagggaaaatcaatgagaaactaaggtgcttacagaacattgttcctggat 617
Query: 563 gttacaagactatgggtatggcaataatgttggatgagatcataaactatgtccagtcct 622
|||||||||| ||||| |||||| ||||||||||||| |||||||||||||| ||||| |
Sbjct: 618 gttacaagaccatgggcatggcagtaatgttggatgaaatcataaactatgtgcagtctt 677
Query: 623 tgcaacatcaagtggagttcctctctatgaagctcactgcagcaagcaccttttatgact 682
|||| ||||||||||||||||| ||| ||||||| || || ||||| |||| ||||||||
Sbjct: 678 tgcagcatcaagtggagttcctttctttgaagcttacagctgcaagtacctattatgact 737
Query: 683 tcaattcagagataaattctttagaggcaatgcagagagcaagggtatccgaggcaaaag 742
||||||| |||| | || || | || |||||||||||||||||| ||| ||||| ||||
Sbjct: 738 tcaattctgagacagatgctattgaaacaatgcagagagcaagggcatcagaggcgaaag 797
Query: 743 agttggcaaagtacgtgacagaaggatatgaaggagtttcttgctttcaaccaacttggc 802
|||| || | ||| || ||||| ||||| ||| ||||||||||||||||||||||||
Sbjct: 798 agttagccaggtataagagagaagaatatgggggaatttcttgctttcaaccaacttggc 857
Query: 803 c 803
|
Sbjct: 858 c 858
>gnl|LJGI|AV772495 homologue to UniRef100_A2Q3E9 Cluster: Helix-loop-helix
DNA-binding; n=1; Medicago truncatula|Rep:
Helix-loop-helix DNA-binding - Medicago truncatula
(Barrel medic), partial (19%)
Length = 572
Score = 63.9 bits (32), Expect = 1e-09
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 467 gaggtcaagctactgatagtcacagtttagcagaaagggttagaagag 514
|||||||||||||||||||||| || ||||||||||||| ||| ||||
Sbjct: 443 gaggtcaagctactgatagtcatagcttagcagaaagggctaggagag 396
>gnl|LJGI|TC78089 similar to UniRef100_A7Q723 Cluster: Chromosome chr5 scaffold_58,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_58, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (22%)
Length = 1046
Score = 61.9 bits (31), Expect = 6e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 595 gatgagatcataaactatgtccagtccttgcaacatcaagtggagttcctctctatgaa 653
||||| || ||||||||||||||||| ||||| | |||||| |||||||| ||||||||
Sbjct: 207 gatgaaattataaactatgtccagtcattgcagcgtcaagttgagttcctatctatgaa 265
Score = 58.0 bits (29), Expect = 9e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 449 ttcatgttagagccagaagaggtcaagctactgatag 485
||||||| ||||| |||||||||||||||||||||||
Sbjct: 61 ttcatgtgagagcaagaagaggtcaagctactgatag 97
>gnl|LJGI|TC60285 similar to UniRef100_Q5U8L7 Cluster: BHLH transcription factor;
n=1; Gossypium hirsutum|Rep: BHLH transcription factor -
Gossypium hirsutum (Upland cotton) (Gossypium
mexicanum), partial (58%)
Length = 828
Score = 56.0 bits (28), Expect = 3e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 449 ttcatgttagagccagaagaggtcaagctactgatagtcacagtttagcaga 500
||||||||||||| ||||| || |||||||||||||| ||||| |||||||
Sbjct: 463 ttcatgttagagcaagaagggggcaagctactgatagccacagcatagcaga 514
>gnl|LJGI|TC74742 similar to UniRef100_A7Q723 Cluster: Chromosome chr5 scaffold_58,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_58, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (17%)
Length = 739
Score = 54.0 bits (27), Expect = 1e-06
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 595 gatgagatcataaactatgtccagtccttgcaacatcaagtggagttcctctctatgaa 653
|||||||| ||||||||||| ||||| ||||||| ||||| ||||| || ||||||||
Sbjct: 84 gatgagattataaactatgttcagtcattgcaacgccaagtagagtttctttctatgaa 142