Miyakogusa Predicted Gene

Lj4g3v3099180.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v3099180.1 Non Chatacterized Hit- tr|B8AAP3|B8AAP3_ORYSI
Putative uncharacterized protein OS=Oryza sativa
subsp,88.46,0.00004,SUBFAMILY NOT NAMED,NULL; F-BOX AND WD40 DOMAIN
PROTEIN,NULL; Domain always found upstream of DENN d,CUFF.52301.1
         (858 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS334740 similar to UniRef100_A7PGQ8 Cluster: Chromosom...  1287   0.0  

>gnl|LJGI|FS334740 similar to UniRef100_A7PGQ8 Cluster: Chromosome chr17 scaffold_16,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr17 scaffold_16, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (18%)
          Length = 747

 Score = 1287 bits (649), Expect = 0.0
 Identities = 649/649 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtctcgaatcttcgagtacttcgtcgtgtgcgggatcggaccggagattcgaaccgtc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99  atgtctcgaatcttcgagtacttcgtcgtgtgcgggatcggaccggagattcgaaccgtc 158

                                                                       
Query: 61  gatggaagcaaaggctaccatggccctgcttgcatgtatcttccttctcttctcgatcag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 gatggaagcaaaggctaccatggccctgcttgcatgtatcttccttctcttctcgatcag 218

                                                                       
Query: 121 tatcctccttctaatcattctctctaccctcctccacctcctcagcttcccacatgtgtt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 tatcctccttctaatcattctctctaccctcctccacctcctcagcttcccacatgtgtt 278

                                                                       
Query: 181 ctaccggctggtgttgagttctattcctcaggatttgattccagtgatccttccacgttt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 ctaccggctggtgttgagttctattcctcaggatttgattccagtgatccttccacgttt 338

                                                                       
Query: 241 ccgcggagctatccgattgttttgaccgagggtgacggttcaaaaatttatgttagttgc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 ccgcggagctatccgattgttttgaccgagggtgacggttcaaaaatttatgttagttgc 398

                                                                       
Query: 301 atttctttccgggatccggtgtgtgaggatattgcggaggcctaccggatacaggcaaat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 atttctttccgggatccggtgtgtgaggatattgcggaggcctaccggatacaggcaaat 458

                                                                       
Query: 361 tcatatgctgacaagtgcatctgtctagtttcacgttcaccaagttttcgtgtaataagg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 tcatatgctgacaagtgcatctgtctagtttcacgttcaccaagttttcgtgtaataagg 518

                                                                       
Query: 421 actgccctagaggaactatttgcactgtgtttttccccaaatggaagcagcaagccgctg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 actgccctagaggaactatttgcactgtgtttttccccaaatggaagcagcaagccgctg 578

                                                                       
Query: 481 tgggatgttatagcacatgtggtgtccagtgtgcctttgccaactcctggaaaagagcgg 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 tgggatgttatagcacatgtggtgtccagtgtgcctttgccaactcctggaaaagagcgg 638

                                                                       
Query: 541 gttctgtttgctattgagaactgtctgctacctgtcgaggctccaccaaaccatggactt 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 gttctgtttgctattgagaactgtctgctacctgtcgaggctccaccaaaccatggactt 698

                                                            
Query: 601 ccctatgttgatatatcattccagcctttggtgcagtgtttggatgttg 649
           |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 ccctatgttgatatatcattccagcctttggtgcagtgtttggatgttg 747