Miyakogusa Predicted Gene
- Lj4g3v3098160.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v3098160.2 tr|G7L912|G7L912_MEDTR Protein CASP OS=Medicago
truncatula GN=MTR_8g103950 PE=4 SV=1,89.46,0,coiled-coil,NULL;
seg,NULL; CASP_C,CASP, C-terminal; CASP,NULL; CCAAT DISPLACEMENT
PROTEIN-RELATED,N,CUFF.52299.2
(993 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC68685 similar to UniRef100_A7PGQ5 Cluster: Chromosome... 728 0.0
gnl|LJGI|AV780749 similar to UniRef100_A0DMV9 Cluster: Chromosom... 86 5e-16
>gnl|LJGI|TC68685 similar to UniRef100_A7PGQ5 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (38%)
Length = 1055
Score = 728 bits (367), Expect = 0.0
Identities = 724/842 (85%), Gaps = 12/842 (1%)
Strand = Plus / Plus
Query: 151 tctcttcttcttgataagaaccgaaaaatggaacacgagctaacacaattgaaggtgaaa 210
||||||||||||||||||||||| ||||||||||| || |||||||| |||||||| |
Sbjct: 6 tctcttcttcttgataagaaccgtaaaatggaacatgaactaacacagttgaaggttacc 65
Query: 211 ctttctgaaaaaacttcttcactcgaaatagcagaacagaaggcagtggaacttactact 270
|||||||| ||||| || | ||| |||| ||||||||||||| |||||| | |
Sbjct: 66 ctttctgagaaaacatccttactggaaacagcagaacagaagattacagaacttgcagca 125
Query: 271 aaggttaatgaacaacaaaaactgatacaaaagttggaagatgatatattaaagggctat 330
||||||||||| ||||||||| ||||||| ||||||||||||||||| | ||||| |||
Sbjct: 126 aaggttaatgagcaacaaaaattgatacagaagttggaagatgatatcctgaagggatat 185
Query: 331 agttctaattccaaagatcataaagga---ttccctgatgactgggatctatccgaggct 387
||||| ||||| ||||||| |||||| |||| ||||||||||||||| || || |||
Sbjct: 186 agttccaattctaaagatcgtaaagggaccttccttgatgactgggatctttcagaagct 245
Query: 388 ggtaggagtgaggtgtctgagaatatg------gatcaaaggcatg---ccttagatcaa 438
||| | |||||| |||||| | | || |||||||| | |||| || |||
Sbjct: 246 ggtggcggtgaggcttctgagcagagtacagcagaccaaaggcaagtggccttggaccaa 305
Query: 439 gatcagagctcaatgcttaaggtaatctgtaatcagagagatcgattcagaatacgcttg 498
|||||||||||||||||||| || ||||||||||||||||||||||| || | |||||||
Sbjct: 306 gatcagagctcaatgcttaaagtgatctgtaatcagagagatcgatttaggacacgcttg 365
Query: 499 cgagagacagaagaggaaataaggcagttgaaggagaagattcgggtactaacaggggaa 558
|||||||||||||||||||||||||||||||||||||||||| ||||| |||||| ||||
Sbjct: 366 cgagagacagaagaggaaataaggcagttgaaggagaagattggggtattaacagtggaa 425
Query: 559 cttgaaaagaccaaagcagataatgtcaagctatatgggaagattcgttatgtccaagat 618
| |||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 426 ttggaaaagaccaaagctgataatgtcaaactatatgggaagattcgttatgtgcaagat 485
Query: 619 tacaatacggcgaaagtggtctctaggggttctaaaaagtatgcagaagatcttgaaagt 678
|| | | | ||||||||| |||||||||||||||||||||||||||||| ||||||||
Sbjct: 486 tatagtcttgagaaagtggtttctaggggttctaaaaagtatgcagaagatgttgaaagt 545
Query: 679 ggtttcacgtcagatgttgaatctaaatacaagaagatatacgaggatgatataaatcct 738
||||| | |||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 546 ggttttgcatcagatgttgaatctaaatacaagaagatatatgaggatgatataaatcct 605
Query: 739 tttgctgcattctcaaaaaaggaaagggatcaaagatacaaggagttgggattcagggac 798
||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 606 tttgcagcattctcaaaaaaggaaagggatcaaagatacaaggaattgggattcagggac 665
Query: 799 agaatcacactcagcagcggacgttttcttcttggtaacaagtatgcccgtacctttgca 858
||||| || |||||||| || |||||||| |||||||||||||||||||| || ||||||
Sbjct: 666 agaattacgctcagcagtgggcgttttctccttggtaacaagtatgcccggacttttgca 725
Query: 859 ttcttctataccatcgggctgcatatgttggtctttacctgtctctatcgaatgtcggct 918
||||| || ||||| || ||||| | ||||||| ||||||||||| |||||||| |||
Sbjct: 726 ttcttttacaccattggattgcatgttctggtcttcacctgtctctaccgaatgtctgct 785
Query: 919 ctgagttatcttagccatggcccagaggaacctctgattggagcgagaaaggttgatctt 978
||||| |||||||| |||||||||||||| || ||||||| || ||| |||||||||
Sbjct: 786 ctgagctatcttagtaatggcccagaggaattcctaattggagagaaaaacgttgatctt 845
Query: 979 cc 980
||
Sbjct: 846 cc 847
>gnl|LJGI|AV780749 similar to UniRef100_A0DMV9 Cluster: Chromosome undetermined
scaffold_57, whole genome shotgun sequence; n=1;
Paramecium tetraurelia|Rep: Chromosome undetermined
scaffold_57, whole genome shotgun sequence - Paramecium
tetraurelia, partial (3%)
Length = 560
Score = 85.7 bits (43), Expect = 5e-16
Identities = 85/91 (93%), Gaps = 6/91 (6%)
Strand = Plus / Minus
Query: 657 gtatgcagaagatcttgaaagtggtttcacgtca-gatg-ttgaatc-taaatac-aaga 712
|||||||||||||||||||||||||||||||||| |||| ||||||| ||||||| ||||
Sbjct: 560 gtatgcagaagatcttgaaagtggtttcacgtcacgatgcttgaatcgtaaatacaaaga 501
Query: 713 a-gatatacgaggat-gatataaatcctttt 741
| ||||||||||||| |||||||||||||||
Sbjct: 500 acgatatacgaggatcgatataaatcctttt 470