Miyakogusa Predicted Gene
- Lj4g3v3098160.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v3098160.1 Non Chatacterized Hit- tr|I0Z2P8|I0Z2P8_9CHLO
Uncharacterized protein OS=Coccomyxa subellipsoidea
C-,32.11,8e-17,CASP,NULL; CCAAT DISPLACEMENT PROTEIN-RELATED,NULL;
coiled-coil,NULL; CASP_C,CASP, C-terminal; seg,N,CUFF.52299.1
(726 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC68685 similar to UniRef100_A7PGQ5 Cluster: Chromosome... 424 e-118
gnl|LJGI|AV780749 similar to UniRef100_A0DMV9 Cluster: Chromosom... 58 8e-08
>gnl|LJGI|TC68685 similar to UniRef100_A7PGQ5 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (38%)
Length = 1055
Score = 424 bits (214), Expect = e-118
Identities = 500/595 (84%), Gaps = 19/595 (3%)
Strand = Plus / Plus
Query: 151 tctcttcttcttgataagaaccgaaaaatggaacacgagctaacacaattgaaggtgaaa 210
||||||||||||||||||||||| ||||||||||| || |||||||| |||||||| |
Sbjct: 6 tctcttcttcttgataagaaccgtaaaatggaacatgaactaacacagttgaaggttacc 65
Query: 211 ctttctgaaaaaacttcttcactcgaaatagcagaacagaaggcagtggaacttactact 270
|||||||| ||||| || | ||| |||| ||||||||||||| |||||| | |
Sbjct: 66 ctttctgagaaaacatccttactggaaacagcagaacagaagattacagaacttgcagca 125
Query: 271 aaggttaatgaacaacaaaaactgatacaaaagttggaagatgatatattaaagggctat 330
||||||||||| ||||||||| ||||||| ||||||||||||||||| | ||||| |||
Sbjct: 126 aaggttaatgagcaacaaaaattgatacagaagttggaagatgatatcctgaagggatat 185
Query: 331 agttctaattccaaagatcataaagga---ttccctgatgactgggatctatccgaggct 387
||||| ||||| ||||||| |||||| |||| ||||||||||||||| || || |||
Sbjct: 186 agttccaattctaaagatcgtaaagggaccttccttgatgactgggatctttcagaagct 245
Query: 388 ggtaggagtgaggtgtctgagaatatg------gatcaaaggcatg---ccttagatcaa 438
||| | |||||| |||||| | | || |||||||| | |||| || |||
Sbjct: 246 ggtggcggtgaggcttctgagcagagtacagcagaccaaaggcaagtggccttggaccaa 305
Query: 439 gatcagagctcaatgcttaaggtaatctgtaatcagagagatcgattcagaatacgcttg 498
|||||||||||||||||||| || ||||||||||||||||||||||| || | |||||||
Sbjct: 306 gatcagagctcaatgcttaaagtgatctgtaatcagagagatcgatttaggacacgcttg 365
Query: 499 cgagagacagaagaggaaataaggcagttgaaggagaagattcgggtactaacaggggaa 558
|||||||||||||||||||||||||||||||||||||||||| ||||| |||||| ||||
Sbjct: 366 cgagagacagaagaggaaataaggcagttgaaggagaagattggggtattaacagtggaa 425
Query: 559 cttgaaaagaccaaagcagataatgtcaagctatatgggaagattcgttatgtccaagat 618
| |||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 426 ttggaaaagaccaaagctgataatgtcaaactatatgggaagattcgttatgtgcaagat 485
Query: 619 tacaatacggcgaaagtggtctctaggggttctaaaa-------agaagatcttgaaagt 671
|| | | | ||||||||| |||||||||||||||| ||||||| ||||||||
Sbjct: 486 tatagtcttgagaaagtggtttctaggggttctaaaaagtatgcagaagatgttgaaagt 545
Query: 672 ggtttcacgtcagatgttgaatctaaatacaagaagatatacgaggatgatataa 726
||||| | |||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 546 ggttttgcatcagatgttgaatctaaatacaagaagatatatgaggatgatataa 600
>gnl|LJGI|AV780749 similar to UniRef100_A0DMV9 Cluster: Chromosome undetermined
scaffold_57, whole genome shotgun sequence; n=1;
Paramecium tetraurelia|Rep: Chromosome undetermined
scaffold_57, whole genome shotgun sequence - Paramecium
tetraurelia, partial (3%)
Length = 560
Score = 58.0 bits (29), Expect = 8e-08
Identities = 64/69 (92%), Gaps = 5/69 (7%)
Strand = Plus / Minus
Query: 656 agaagatcttgaaagtggtttcacgtca-gatg-ttgaatc-taaatac-aagaa-gata 710
|||||||||||||||||||||||||||| |||| ||||||| ||||||| ||||| ||||
Sbjct: 554 agaagatcttgaaagtggtttcacgtcacgatgcttgaatcgtaaatacaaagaacgata 495
Query: 711 tacgaggat 719
|||||||||
Sbjct: 494 tacgaggat 486