Miyakogusa Predicted Gene
- Lj4g3v3097120.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v3097120.1 tr|G7JX53|G7JX53_MEDTR Replication protein
A1-like protein OS=Medicago truncatula GN=MTR_5g053590
PE,30.86,2e-17,seg,NULL; no description,Nucleic acid-binding, OB-fold;
REPLICATION FACTOR A 1, RFA1,NULL; DUF223,Do,gene.g58016.t1.1
(1116 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS335826 weakly similar to UniRef100_A7BPV8 Cluster: Pr... 928 0.0
gnl|LJGI|TC62120 weakly similar to UniRef100_Q3E7P5 Cluster: Unc... 928 0.0
gnl|LJGI|TC65922 weakly similar to UniRef100_A7BPV8 Cluster: Pro... 912 0.0
gnl|LJGI|TC61763 805 0.0
gnl|LJGI|TC64203 779 0.0
gnl|LJGI|BW599159 549 e-155
gnl|LJGI|FS326212 similar to UniRef100_Q03GU9 Cluster: Glutamine... 281 5e-75
gnl|LJGI|TC65815 281 5e-75
gnl|LJGI|TC63649 281 5e-75
gnl|LJGI|TC79247 similar to UniRef100_Q63DZ1 Cluster: Group-spec... 274 1e-72
>gnl|LJGI|FS335826 weakly similar to UniRef100_A7BPV8 Cluster: Protein involved in
sulfur oxidation dsrL; n=1; Beggiatoa sp. PS|Rep:
Protein involved in sulfur oxidation dsrL - Beggiatoa
sp. PS, partial (3%)
Length = 775
Score = 928 bits (468), Expect = 0.0
Identities = 471/472 (99%)
Strand = Plus / Plus
Query: 1 atggcacgtaagactagcttgattgctgaagttgatgattcaaaagaaacatggaaattg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87 atggcacgtaagactagcttgattgctgaagttgatgattcaaaagaaacatggaaattg 146
Query: 61 ggagtaagaataactaatctttgggttgttgagaagtcatcgaaagtgaatgctatggaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 147 ggagtaagaataactaatctttgggttgttgagaagtcatcgaaagtgaatgccatggaa 206
Query: 121 atgatatttatggatcaaaagggaggaaaaattacagctgtagtgaaaaaattcgatatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 atgatatttatggatcaaaagggaggaaaaattacagctgtagtgaaaaaattcgatatt 266
Query: 181 gacaagtggaagtcaatgcttaaggaggacaacacttatattgttcaaaactttgaggtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 gacaagtggaagtcaatgcttaaggaggacaacacttatattgttcaaaactttgaggtt 326
Query: 241 aaccacaatgatggtcaatttaggacttcaaatcatccttacaaattagttttcatgaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 aaccacaatgatggtcaatttaggacttcaaatcatccttacaaattagttttcatgaaa 386
Query: 301 gggacaatagtgcaagcgcgtcaaattcctgaaatacctcataatatttatcacttcact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 gggacaatagtgcaagcgcgtcaaattcctgaaatacctcataatatttatcacttcact 446
Query: 361 ccctttgatgacatcttagcgggaggtgcatctactgaagtgttagtagatgtgatcggt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 ccctttgatgacatcttagcgggaggtgcatctactgaagtgttagtagatgtgatcggt 506
Query: 421 gaattgtcagatgtcgtacaaattcaaaaagagagtgtgccaaaaagggtgg 472
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 gaattgtcagatgtcgtacaaattcaaaaagagagtgtgccaaaaagggtgg 558
>gnl|LJGI|TC62120 weakly similar to UniRef100_Q3E7P5 Cluster: Uncharacterized protein
At5g36830.1; n=1; Arabidopsis thaliana|Rep:
Uncharacterized protein At5g36830.1 - Arabidopsis
thaliana (Mouse-ear cress), partial (15%)
Length = 870
Score = 928 bits (468), Expect = 0.0
Identities = 471/472 (99%)
Strand = Plus / Plus
Query: 1 atggcacgtaagactagcttgattgctgaagttgatgattcaaaagaaacatggaaattg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 atggcacgtaagactagcttgattgctgaagttgatgattcaaaagaaacatggaaattg 290
Query: 61 ggagtaagaataactaatctttgggttgttgagaagtcatcgaaagtgaatgctatggaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 291 ggagtaagaataactaatctttgggttgttgagaagtcatcgaaagtgaatgcaatggaa 350
Query: 121 atgatatttatggatcaaaagggaggaaaaattacagctgtagtgaaaaaattcgatatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 atgatatttatggatcaaaagggaggaaaaattacagctgtagtgaaaaaattcgatatt 410
Query: 181 gacaagtggaagtcaatgcttaaggaggacaacacttatattgttcaaaactttgaggtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 gacaagtggaagtcaatgcttaaggaggacaacacttatattgttcaaaactttgaggtt 470
Query: 241 aaccacaatgatggtcaatttaggacttcaaatcatccttacaaattagttttcatgaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 aaccacaatgatggtcaatttaggacttcaaatcatccttacaaattagttttcatgaaa 530
Query: 301 gggacaatagtgcaagcgcgtcaaattcctgaaatacctcataatatttatcacttcact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 gggacaatagtgcaagcgcgtcaaattcctgaaatacctcataatatttatcacttcact 590
Query: 361 ccctttgatgacatcttagcgggaggtgcatctactgaagtgttagtagatgtgatcggt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 ccctttgatgacatcttagcgggaggtgcatctactgaagtgttagtagatgtgatcggt 650
Query: 421 gaattgtcagatgtcgtacaaattcaaaaagagagtgtgccaaaaagggtgg 472
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 gaattgtcagatgtcgtacaaattcaaaaagagagtgtgccaaaaagggtgg 702
>gnl|LJGI|TC65922 weakly similar to UniRef100_A7BPV8 Cluster: Protein involved in
sulfur oxidation dsrL; n=1; Beggiatoa sp. PS|Rep:
Protein involved in sulfur oxidation dsrL - Beggiatoa
sp. PS, partial (3%)
Length = 751
Score = 912 bits (460), Expect = 0.0
Identities = 469/472 (99%)
Strand = Plus / Plus
Query: 1 atggcacgtaagactagcttgattgctgaagttgatgattcaaaagaaacatggaaattg 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 115 atggcacgtaagactagctcgattgctgaagttgatgattcaaaagaaacatggaaattg 174
Query: 61 ggagtaagaataactaatctttgggttgttgagaagtcatcgaaagtgaatgctatggaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 175 ggagtaagaataactaatctttgggttgttgagaagtcatcgaaagtgaatgcaatggaa 234
Query: 121 atgatatttatggatcaaaagggaggaaaaattacagctgtagtgaaaaaattcgatatt 180
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 235 atgatatttatggatcaaaagggaggaaaaattacagctatagtgaaaaaattcgatatt 294
Query: 181 gacaagtggaagtcaatgcttaaggaggacaacacttatattgttcaaaactttgaggtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 gacaagtggaagtcaatgcttaaggaggacaacacttatattgttcaaaactttgaggtt 354
Query: 241 aaccacaatgatggtcaatttaggacttcaaatcatccttacaaattagttttcatgaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 aaccacaatgatggtcaatttaggacttcaaatcatccttacaaattagttttcatgaaa 414
Query: 301 gggacaatagtgcaagcgcgtcaaattcctgaaatacctcataatatttatcacttcact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 gggacaatagtgcaagcgcgtcaaattcctgaaatacctcataatatttatcacttcact 474
Query: 361 ccctttgatgacatcttagcgggaggtgcatctactgaagtgttagtagatgtgatcggt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 ccctttgatgacatcttagcgggaggtgcatctactgaagtgttagtagatgtgatcggt 534
Query: 421 gaattgtcagatgtcgtacaaattcaaaaagagagtgtgccaaaaagggtgg 472
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 gaattgtcagatgtcgtacaaattcaaaaagagagtgtgccaaaaagggtgg 586
>gnl|LJGI|TC61763
Length = 999
Score = 805 bits (406), Expect = 0.0
Identities = 406/406 (100%)
Strand = Plus / Plus
Query: 711 tgaaggtgaatttgatgcaatggttgttccagaaccaattgattgcattcttggaaaact 770
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 tgaaggtgaatttgatgcaatggttgttccagaaccaattgattgcattcttggaaaact 361
Query: 771 gtttgcctttaaagttaaggttcaacccggctacaaacagttttctgtcacaggagtttc 830
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 gtttgcctttaaagttaaggttcaacccggctacaaacagttttctgtcacaggagtttc 421
Query: 831 tgataatgaaaagaccattgaaagcataagggacaaattgcaagttgatgaggattccct 890
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 tgataatgaaaagaccattgaaagcataagggacaaattgcaagttgatgaggattccct 481
Query: 891 aatgagcaagaaagggaaatcaattagctccttcctcaaagaagatgatgcatatgagat 950
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 aatgagcaagaaagggaaatcaattagctccttcctcaaagaagatgatgcatatgagat 541
Query: 951 tcaatcattgtctgcaacagctgattctgatactacatcaataggacattgtactcctgc 1010
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 tcaatcattgtctgcaacagctgattctgatactacatcaataggacattgtactcctgc 601
Query: 1011 taagagattgtcaaaggatacactagatgatgattttgcatgccaagatttgccttctgt 1070
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 taagagattgtcaaaggatacactagatgatgattttgcatgccaagatttgccttctgt 661
Query: 1071 tcaactctcttcttcaaaagtcacaaagcacatcaaaactgaatga 1116
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 tcaactctcttcttcaaaagtcacaaagcacatcaaaactgaatga 707
Score = 476 bits (240), Expect = e-133
Identities = 240/240 (100%)
Strand = Plus / Plus
Query: 472 gaaggtgaatttgatgcaatggttgttccagaaccaattgattgcattcttggaaaactg 531
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 gaaggtgaatttgatgcaatggttgttccagaaccaattgattgcattcttggaaaactg 362
Query: 532 tttgcctttaaagttaaggttcaacccggctacaaacagttttctgtcacaggagtttct 591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 tttgcctttaaagttaaggttcaacccggctacaaacagttttctgtcacaggagtttct 422
Query: 592 gataatgaaaagaccattgaaagcataagggacaaattgcaagttgatgaggattcccta 651
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 gataatgaaaagaccattgaaagcataagggacaaattgcaagttgatgaggattcccta 482
Query: 652 atgagcaagaaagggaaatcaattagctccttcctcaaagaagatgatgcatatgagatt 711
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 atgagcaagaaagggaaatcaattagctccttcctcaaagaagatgatgcatatgagatt 542
>gnl|LJGI|TC64203
Length = 739
Score = 779 bits (393), Expect = 0.0
Identities = 402/405 (99%)
Strand = Plus / Plus
Query: 712 gaaggtgaatttgatgcaatggttgttccagaaccaattgattgcattcttggaaaactg 771
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 85 gaaggtgaatttgatgcaatggctgttccagaaccaattgattgcattcttggaaaactg 144
Query: 772 tttgcctttaaagttaaggttcaacccggctacaaacagttttctgtcacaggagtttct 831
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 tttgcctttaaagttaaggttcaacccggctacaaacagttttctgtcacaggagtttct 204
Query: 832 gataatgaaaagaccattgaaagcataagggacaaattgcaagttgatgaggattcccta 891
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gataatgaaaagaccattgaaagcataagggacaaattgcaagttgatgaggattcccta 264
Query: 892 atgagcaagaaagggaaatcaattagctccttcctcaaagaagatgatgcatatgagatt 951
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 atgagcaagaaagggaaatcaattagctccttcctcaaagaagatgatgcatatgagatt 324
Query: 952 caatcattgtctgcaacagctgattctgatactacatcaataggacattgtactcctgct 1011
|||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 325 caatcattgtttgcaacagctgattttgatactacatcaataggacattgtactcctgct 384
Query: 1012 aagagattgtcaaaggatacactagatgatgattttgcatgccaagatttgccttctgtt 1071
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aagagattgtcaaaggatacactagatgatgattttgcatgccaagatttgccttctgtt 444
Query: 1072 caactctcttcttcaaaagtcacaaagcacatcaaaactgaatga 1116
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 caactctcttcttcaaaagtcacaaagcacatcaaaactgaatga 489
Score = 470 bits (237), Expect = e-132
Identities = 240/241 (99%)
Strand = Plus / Plus
Query: 471 ggaaggtgaatttgatgcaatggttgttccagaaccaattgattgcattcttggaaaact 530
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 84 ggaaggtgaatttgatgcaatggctgttccagaaccaattgattgcattcttggaaaact 143
Query: 531 gtttgcctttaaagttaaggttcaacccggctacaaacagttttctgtcacaggagtttc 590
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 gtttgcctttaaagttaaggttcaacccggctacaaacagttttctgtcacaggagtttc 203
Query: 591 tgataatgaaaagaccattgaaagcataagggacaaattgcaagttgatgaggattccct 650
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 tgataatgaaaagaccattgaaagcataagggacaaattgcaagttgatgaggattccct 263
Query: 651 aatgagcaagaaagggaaatcaattagctccttcctcaaagaagatgatgcatatgagat 710
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 aatgagcaagaaagggaaatcaattagctccttcctcaaagaagatgatgcatatgagat 323
Query: 711 t 711
|
Sbjct: 324 t 324
>gnl|LJGI|BW599159
Length = 394
Score = 549 bits (277), Expect = e-155
Identities = 306/316 (96%)
Strand = Plus / Plus
Query: 1 atggcacgtaagactagcttgattgctgaagttgatgattcaaaagaaacatggaaattg 60
|||||||||||||||||||||||||||||||||||||||||| || | |||||||||
Sbjct: 79 atggcacgtaagactagcttgattgctgaagttgatgattcaccngaggcgtggaaattg 138
Query: 61 ggagtaagaataactaatctttgggttgttgagaagtcatcgaaagtgaatgctatggaa 120
||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 139 ggagtaagaataactaatctttgggttgtagagaagtcatcgaaagtgaatgccatggaa 198
Query: 121 atgatatttatggatcaaaagggaggaaaaattacagctgtagtgaaaaaattcgatatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 atgatatttatggatcaaaagggaggaaaaattacagctgtagtgaaaaaattcgatatt 258
Query: 181 gacaagtggaagtcaatgcttaaggaggacaacacttatattgttcaaaactttgaggtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 gacaagtggaagtcaatgcttaaggaggacaacacttatattgttcaaaactttgaggtt 318
Query: 241 aaccacaatgatggtcaatttaggacttcaaatcatccttacaaattagttttcatgaaa 300
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 319 aaccacaatgatggtcaatttaggactttcaatcatccttacaaattagttttcatgaaa 378
Query: 301 gggacaatagtgcaag 316
||||||||||||||||
Sbjct: 379 gggacaatagtgcaag 394
>gnl|LJGI|FS326212 similar to UniRef100_Q03GU9 Cluster:
Glutamine--fructose-6-phosphate transaminase; n=1;
Pediococcus pentosaceus ATCC 25745|Rep:, partial (2%)
Length = 765
Score = 281 bits (142), Expect = 5e-75
Identities = 142/142 (100%)
Strand = Plus / Plus
Query: 1 atggcacgtaagactagcttgattgctgaagttgatgattcaaaagaaacatggaaattg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96 atggcacgtaagactagcttgattgctgaagttgatgattcaaaagaaacatggaaattg 155
Query: 61 ggagtaagaataactaatctttgggttgttgagaagtcatcgaaagtgaatgctatggaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 ggagtaagaataactaatctttgggttgttgagaagtcatcgaaagtgaatgctatggaa 215
Query: 121 atgatatttatggatcaaaagg 142
||||||||||||||||||||||
Sbjct: 216 atgatatttatggatcaaaagg 237
>gnl|LJGI|TC65815
Length = 696
Score = 281 bits (142), Expect = 5e-75
Identities = 142/142 (100%)
Strand = Plus / Plus
Query: 1 atggcacgtaagactagcttgattgctgaagttgatgattcaaaagaaacatggaaattg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95 atggcacgtaagactagcttgattgctgaagttgatgattcaaaagaaacatggaaattg 154
Query: 61 ggagtaagaataactaatctttgggttgttgagaagtcatcgaaagtgaatgctatggaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 ggagtaagaataactaatctttgggttgttgagaagtcatcgaaagtgaatgctatggaa 214
Query: 121 atgatatttatggatcaaaagg 142
||||||||||||||||||||||
Sbjct: 215 atgatatttatggatcaaaagg 236
>gnl|LJGI|TC63649
Length = 813
Score = 281 bits (142), Expect = 5e-75
Identities = 142/142 (100%)
Strand = Plus / Plus
Query: 1 atggcacgtaagactagcttgattgctgaagttgatgattcaaaagaaacatggaaattg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 atggcacgtaagactagcttgattgctgaagttgatgattcaaaagaaacatggaaattg 217
Query: 61 ggagtaagaataactaatctttgggttgttgagaagtcatcgaaagtgaatgctatggaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 ggagtaagaataactaatctttgggttgttgagaagtcatcgaaagtgaatgctatggaa 277
Query: 121 atgatatttatggatcaaaagg 142
||||||||||||||||||||||
Sbjct: 278 atgatatttatggatcaaaagg 299
>gnl|LJGI|TC79247 similar to UniRef100_Q63DZ1 Cluster: Group-specific protein; n=2;
Bacillus cereus group|Rep: Group-specific protein -
Bacillus cereus (strain ZK / E33L), partial (10%)
Length = 790
Score = 274 bits (138), Expect = 1e-72
Identities = 150/154 (97%)
Strand = Plus / Plus
Query: 1 atggcacgtaagactagcttgattgctgaagttgatgattcaaaagaaacatggaaattg 60
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 atggcacgtaagactaccttgattgctgaagttgatgattcaaaagaaacatggaaattg 696
Query: 61 ggagtaagaataactaatctttgggttgttgagaagtcatcgaaagtgaatgctatggaa 120
||||||| |||||||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 697 ggagtaaaaataactaatctttgggttgttgaaaagtcatcaaaagtgaatgctatggaa 756
Query: 121 atgatatttatggatcaaaagggaggaaaaatta 154
||||||||||||||||||||||||||||||||||
Sbjct: 757 atgatatttatggatcaaaagggaggaaaaatta 790