Miyakogusa Predicted Gene

Lj4g3v3095020.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v3095020.1 Non Chatacterized Hit- tr|F6GTJ2|F6GTJ2_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,53.98,0,ASP_PROTEASE,Peptidase aspartic, active site; no
description,Peptidase aspartic, catalytic; CHLOROPL,CUFF.52249.1
         (1492 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC71801 similar to UniRef100_A7PGQ3 Cluster: Chromosome...    74   3e-12
gnl|LJGI|TC69802 similar to UniRef100_A7P351 Cluster: Chromosome...    54   3e-06

>gnl|LJGI|TC71801 similar to UniRef100_A7PGQ3 Cluster: Chromosome chr17 scaffold_16,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr17 scaffold_16, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (80%)
          Length = 2085

 Score = 73.8 bits (37), Expect = 3e-12
 Identities = 85/101 (84%)
 Strand = Plus / Plus

                                                                        
Query: 886  atcaaagcgtcgtcgttttcgtattgcttggtgtaccgcgacacgaacaaatcgtcgacg 945
            |||||||| |||||||| ||||| ||||||||| |||| ||| |    ||||||||||||
Sbjct: 940  atcaaagcatcgtcgttctcgtactgcttggtggaccgtgactcagggaaatcgtcgacg 999

                                                     
Query: 946  cttgagttcaactcgccccgacccggagactcagtgactgc 986
            || |||||||||||  | |||||||| |||||||| |||||
Sbjct: 1000 ctcgagttcaactcagctcgacccggcgactcagtcactgc 1040



 Score = 63.9 bits (32), Expect = 3e-09
 Identities = 80/96 (83%)
 Strand = Plus / Plus

                                                                       
Query: 514 ttctacatagttcccgacacaggaagcgacatcaactggatccagtgcaagccctgcaac 573
           |||||||| |||| |||||| ||||||||| | |||||| | || |||||||| ||    
Sbjct: 568 ttctacatggttctcgacaccggaagcgacgtgaactggcttcaatgcaagccttgtgct 627

                                               
Query: 574 caatgctacaaacaatccgacccgattttcgacccg 609
            | |||||| ||||||||||||||||||||||||||
Sbjct: 628 gattgctaccaacaatccgacccgattttcgacccg 663



 Score = 60.0 bits (30), Expect = 4e-08
 Identities = 42/46 (91%)
 Strand = Plus / Plus

                                                          
Query: 1405 atagggaacgtgcaacagcaagggacacgtgtcagctttgatcttg 1450
            |||||||||||||| || || ||||||||||||||||| |||||||
Sbjct: 1459 atagggaacgtgcagcaacaggggacacgtgtcagcttcgatcttg 1504


>gnl|LJGI|TC69802 similar to UniRef100_A7P351 Cluster: Chromosome chr1 scaffold_5,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr1 scaffold_5, whole genome shotgun sequence
            - Vitis vinifera (Grape), partial (33%)
          Length = 701

 Score = 54.0 bits (27), Expect = 3e-06
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                   
Query: 1399 tcgatcatagggaacgtgcaacagcaagggacacgtgtc 1437
            |||||||| ||||||||||| ||||| ||||||||||||
Sbjct: 415  tcgatcattgggaacgtgcagcagcaggggacacgtgtc 453