Miyakogusa Predicted Gene

Lj4g3v3095000.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v3095000.2 Non Chatacterized Hit- tr|I1M9L4|I1M9L4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.30378
PE,43.27,2e-18,DNase I-like,Endonuclease/exonuclease/phosphatase;
CARBON CATABOLITE REPRESSOR PROTEIN 4-RELATED,NUL,CUFF.52254.2
         (1269 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AV777508 homologue to UniRef100_Q5IRM8 Cluster: Interfe...   174   9e-43

>gnl|LJGI|AV777508 homologue to UniRef100_Q5IRM8 Cluster: Interferon-tau; n=1; Bubalus
            bubalis|Rep: Interferon-tau - Bubalus bubalis (Domestic
            water buffalo), partial (7%)
          Length = 325

 Score =  174 bits (88), Expect = 9e-43
 Identities = 91/92 (98%)
 Strand = Plus / Minus

                                                                        
Query: 1178 agaaagtgggaagcgaccatttggctttggtttctgaattttccttctcagttacccata 1237
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229  agaaagtgggaagcgaccatttggctttggtttctgaattttccttctcagttacccata 170

                                            
Query: 1238 ataaaccaactgacacagcatcctctagagta 1269
            ||||| ||||||||||||||||||||||||||
Sbjct: 169  ataaatcaactgacacagcatcctctagagta 138