Miyakogusa Predicted Gene
- Lj4g3v3093960.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v3093960.1 Non Chatacterized Hit- tr|C5WV23|C5WV23_SORBI
Putative uncharacterized protein Sb01g003340
OS=Sorghu,58.57,8e-18,HMA, heavy metal-associated domain,Heavy
metal-associated domain, HMA; HMA_2,Heavy metal-associated
,CUFF.52244.1
(405 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60377 similar to UniRef100_A7PET1 Cluster: Chromosome... 281 2e-75
gnl|LJGI|BW599467 UniRef100_Q4T514 Cluster: Chromosome 1 SCAF947... 74 7e-13
>gnl|LJGI|TC60377 similar to UniRef100_A7PET1 Cluster: Chromosome chr11 scaffold_13,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_13, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (89%)
Length = 755
Score = 281 bits (142), Expect = 2e-75
Identities = 322/382 (84%)
Strand = Plus / Plus
Query: 1 atggggaaaattggtagaatgttggacactttctgtctttcttcttgttcaaatccctgc 60
||||||||| | || || ||||||| ||| ||||||||||||||| || | || |||||
Sbjct: 134 atggggaaactagggaggatgttgggcacattctgtctttcttctggtgccaaaacctgc 193
Query: 61 ttctgtgtaaattccatagaatttgaagatgaatttgagagcaagcctttgattgcaaat 120
||||| | ||||||| ||||||||||||| || |||| || || ||||||| | |
Sbjct: 194 ttctgcatgaattccactcaatttgaagatgagttggagaaaaatcccttgattggtagt 253
Query: 121 ggcagtgatcataaactgagactgaaggatgttgttgctggaaagcaaacattgggtttt 180
|||| |||||||| ||||||| ||||||||||||| ||||| || || ||||||| ||||
Sbjct: 254 ggcactgatcatacactgagaatgaaggatgttgtagctgggaaacagacattggctttt 313
Query: 181 caattgaagcccaagattgtgatattgagggtgtcaatgcattgccatgcctgtgcgagg 240
|||||||| ||| |||| ||||| ||||||||||| ||||||||||||| |||||| |
Sbjct: 314 caattgaaaccccagatagtgatgttgagggtgtccatgcattgccatggctgtgctaaa 373
Query: 241 aaagttgagaaacatatctcaaagctggaaggagtgagctcatacaaggtagatctggtt 300
||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| | |
Sbjct: 374 caagttgagaaacatatctcgaagctggaaggagtgagctcatacaaggtggatcttgat 433
Query: 301 aataaaactgtagttgttattggtgacattctccctatggaagtgttggaaagtgtgtct 360
|||| ||||||||||| ||||||||||| || | |||||||||||||||||||||
Sbjct: 434 tccaaaatggtagttgttatgggtgacattcttccctttgaagtgttggaaagtgtgtct 493
Query: 361 aaagtgaaaaatgcacagcttt 382
|| |||||||||||| ||||||
Sbjct: 494 aaggtgaaaaatgcagagcttt 515
>gnl|LJGI|BW599467 UniRef100_Q4T514 Cluster: Chromosome 1 SCAF9472 whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:,
partial (2%)
Length = 488
Score = 73.8 bits (37), Expect = 7e-13
Identities = 94/113 (83%)
Strand = Plus / Plus
Query: 169 acattgggttttcaattgaagcccaagattgtgatattgagggtgtcaatgcattgccat 228
||||||| ||||||||||| ||| | || | ||| || |||||||| ||||| ||||||
Sbjct: 34 acattggattttcaattgataccccaaatagcgatgttcagggtgtccatgcaatgccat 93
Query: 229 gcctgtgcgaggaaagttgagaaacatatctcaaagctggaaggagtgagctc 281
| |||||| | || |||| ||||||||||| ||||||||||||||||||||
Sbjct: 94 ggctgtgctacacaacttgaaaaacatatctcgaagctggaaggagtgagctc 146