Miyakogusa Predicted Gene

Lj4g3v3093940.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v3093940.1 Non Chatacterized Hit- tr|C5X513|C5X513_SORBI
Putative uncharacterized protein Sb02g010480
OS=Sorghu,32,0.001,seg,NULL,CUFF.52239.1
         (348 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO011303 similar to UniRef100_Q69ZA4 Cluster: MKIAA1783...   682   0.0  

>gnl|LJGI|GO011303 similar to UniRef100_Q69ZA4 Cluster: MKIAA1783 protein; n=1; Mus
           musculus|Rep: MKIAA1783 protein - Mus musculus (Mouse),
           partial (2%)
          Length = 641

 Score =  682 bits (344), Expect = 0.0
 Identities = 347/348 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgcaatggggtttccttggcgctttctttccctccctcccgccagggcatgaactttac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165 atgcaatggggtttccttggcgctttctttccctccctcccgccagggcatgaactttac 224

                                                                       
Query: 61  tacatcttcactcgtcagcccgaccacggcgtcaaggaccttaaggcttactgcatcgga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 tacatcttcactcgtcagcccgaccacggcgtcaaggaccttaaggcttactgcatcgga 284

                                                                       
Query: 121 attctctctaacgtccttggcagtgatgatgctgcagaaggggcttacctttttcataac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 attctctctaacgtccttggcagtgatgatgctgcagaaggggcttacctttttcataac 344

                                                                       
Query: 181 cctactggcttctttgcctattttcctcttgacaaggctgatctacttcaagagcatccc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 cctactggcttctttgcctattttcctcttgacaaggctgatctacttcaagagcatccc 404

                                                                       
Query: 241 agcgttattcaggtttgcccccagttcaaacctttcccctccccgcccggcccggcccca 300
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 agcgttattcagggttgcccccagttcaaacctttcccctccccgcccggcccggcccca 464

                                                           
Query: 301 atcaacctatcctattttcctcctgacaaggcgctaattgattgaatt 348
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 atcaacctatcctattttcctcctgacaaggcgctaattgattgaatt 512