Miyakogusa Predicted Gene

Lj4g3v3092820.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v3092820.1 Non Chatacterized Hit- tr|K3XFU6|K3XFU6_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si000765,32.31,6e-19,Frigida,Frigida-like; FAMILY NOT
NAMED,NULL,95866_g.1
         (874 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC72867 weakly similar to UniRef100_A7PER4 Cluster: Chr...   916   0.0  
gnl|LJGI|TC82081 weakly similar to UniRef100_A7PER4 Cluster: Chr...   250   1e-65

>gnl|LJGI|TC72867 weakly similar to UniRef100_A7PER4 Cluster: Chromosome chr11
           scaffold_13, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr11 scaffold_13, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (31%)
          Length = 741

 Score =  916 bits (462), Expect = 0.0
 Identities = 465/466 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcgaccaaattggcaacaacaccaccctctgacagggtcgaacaattcttccaggaa 60
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 71  atggcgaccaaattggcaacaacaccaccctcagacagggtcgaacaattcttccaggaa 130

                                                                       
Query: 61  ctgcaaacccacaagagcatcatcgccacctgcaccgacctattcaccaccctctccacc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 ctgcaaacccacaagagcatcatcgccacctgcaccgacctattcaccaccctctccacc 190

                                                                       
Query: 121 cacttctcctccctccaacattccctctccgagaaaacccaatccctcgaatccaagttc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 cacttctcctccctccaacattccctctccgagaaaacccaatccctcgaatccaagttc 250

                                                                       
Query: 181 caaaccctagattcccactacaatgaaaccctcgaatcgctcaacacccacgagacctcc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 caaaccctagattcccactacaatgaaaccctcgaatcgctcaacacccacgagacctcc 310

                                                                       
Query: 241 atcccggagcgcgagtccgccgctgccgctcgtatcgacgagcagaaggaagccgctatc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 atcccggagcgcgagtccgccgctgccgctcgtatcgacgagcagaaggaagccgctatc 370

                                                                       
Query: 301 gctgagttccgaaacccccttccgtcggactccgaattgcccgccacgttgaaatccctt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 gctgagttccgaaacccccttccgtcggactccgaattgcccgccacgttgaaatccctt 430

                                                                       
Query: 361 tcgcggaagatggactcttccgcgttgttgcggttcattgtttccaagcggaaggagtcg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 tcgcggaagatggactcttccgcgttgttgcggttcattgtttccaagcggaaggagtcg 490

                                                         
Query: 421 tcgtggctgagggcggagatagcgccggcgatagcggaggcggtgg 466
           ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 tcgtggctgagggcggagatagcgccggcgatagcggaggcggtgg 536



 Score =  446 bits (225), Expect = e-124
 Identities = 237/241 (98%)
 Strand = Plus / Plus

                                                                       
Query: 467 gggcggagatgccgccggcgatagcgggggcggtggccccgccgaagctggtgttggacg 526
           ||||||||||  ||||||||||||||| |||||||| |||||||||||||||||||||||
Sbjct: 501 gggcggagatagcgccggcgatagcggaggcggtggacccgccgaagctggtgttggacg 560

                                                                       
Query: 527 cggtggaggaatttctcaatagcaaaatgatgggttctaagtctgggctcaccgataaga 586
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cggtggaggaatttctcaatagcaaaatgatgggttctaagtctgggctcaccgataaga 620

                                                                       
Query: 587 ggtgggcatgtgggcttctggttcaggctctgagttcggactcgccggggttctctagaa 646
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ggtgggcatgtgggcttctggttcaggctctgagttcggactcgccggggttctctagaa 680

                                                                       
Query: 647 gggttgttgagagagctgtgggtctcttggattcgtggaaggagcagatggatagtgata 706
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gggttgttgagagagctgtgggtctcttggattcgtggaaggagcagatggatagtgata 740

            
Query: 707 c 707
           |
Sbjct: 741 c 741


>gnl|LJGI|TC82081 weakly similar to UniRef100_A7PER4 Cluster: Chromosome chr11
           scaffold_13, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr11 scaffold_13, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (32%)
          Length = 928

 Score =  250 bits (126), Expect = 1e-65
 Identities = 126/126 (100%)
 Strand = Plus / Plus

                                                                       
Query: 749 tggtgtgctttgggttgaggtccaggttcgatgaggagtatttgaggaagctggtcatgg 808
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   tggtgtgctttgggttgaggtccaggttcgatgaggagtatttgaggaagctggtcatgg 60

                                                                       
Query: 809 agtttggtaccaggagggatatggcaaagcttgctgcttcattggatttcggcgacgaga 868
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  agtttggtaccaggagggatatggcaaagcttgctgcttcattggatttcggcgacgaga 120

                 
Query: 869 tgatag 874
           ||||||
Sbjct: 121 tgatag 126