Miyakogusa Predicted Gene
- Lj4g3v3071600.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v3071600.1 Non Chatacterized Hit- tr|G7L895|G7L895_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,90.77,0,seg,NULL; DUF502,Protein of unknown function DUF502;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL,CUFF.52232.1
(813 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC73614 homologue to UniRef100_A7PEN5 Cluster: Chromoso... 1045 0.0
gnl|LJGI|BW620381 homologue to UniRef100_A7PEN5 Cluster: Chromos... 609 e-173
gnl|LJGI|TC70030 homologue to UniRef100_A7PEN5 Cluster: Chromoso... 515 e-145
gnl|LJGI|TC77250 homologue to UniRef100_A7PEN5 Cluster: Chromoso... 432 e-120
gnl|LJGI|TC78745 homologue to UniRef100_A7PEN5 Cluster: Chromoso... 161 8e-39
gnl|LJGI|TC59243 similar to UniRef100_Q8S1P4 Cluster: Membrane p... 88 1e-16
gnl|LJGI|TC58402 similar to UniRef100_Q8S1P4 Cluster: Membrane p... 72 6e-12
>gnl|LJGI|TC73614 homologue to UniRef100_A7PEN5 Cluster: Chromosome chr11
scaffold_13, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr11 scaffold_13, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (67%)
Length = 797
Score = 1045 bits (527), Expect = 0.0
Identities = 544/552 (98%)
Strand = Plus / Plus
Query: 37 gcggttatggccaatagagacagagatcgagagcttctcatccccgtcgctaacaccgcc 96
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 gcggttatggccaatagagacagagatcgagagcttctcatccccgtcgctaacaccgcc 267
Query: 97 gacgccgctgacacctccaaaccgtcctcttcctcctccgccatgcatcatgccggccgc 156
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 268 gacgccgctgacacctccaaaccgtcctcttcctcctccgccatgcgtcatgccggccgc 327
Query: 157 gagactttttacaaagttgttaggagctgggcatcaaaaaagttcatgactggatgtgtc 216
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 gagactttttacaaagttgttaggagctgggcatcaaaaaagttcatgactggatgtgtc 387
Query: 217 attcttttgccaatcgcaatcaccttctacataacatggtggtttattcatttcgtggat 276
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 attcttttgccaatcgcaatcaccttctacataacatggtggtttattcatttcgtggat 447
Query: 277 gggnnnnnnnctccaatctatgctcaacttggaatcaatatctttggtcttggattcata 336
||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 gggtttttttctccaatctatgctcaacttggaatcaatatctttggtcttggattcata 507
Query: 337 acttccataactttcatcttcttggttggggttttcatgtcatcctggttgggtgcatct 396
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 acttccataactttcatcttcttggttggggttttcatgtcatcctggttgggtgcatct 567
Query: 397 gtcctgggacttggggagtggtttattaagcggatgcctcttgttcgtcatatctataat 456
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 gtcctgggacttggggagtggtttattaagcggatgcctcttgttcgtcatatctataat 627
Query: 457 gcctccaagcaaatcagtgctgctatttcaccagatcaaaattcacaagcctttaaagaa 516
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 gcctccaagcaaatcagtgctgctatttcaccagatcaaaattcacaagcctttaaagaa 687
Query: 517 gtagccatcattcggcatccacgtgttggtgaatatgcatttggattcatcacctcatct 576
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 gtagccatcattcggcatccacgtgttggtgaatatgcatttggattcatcacctcatct 747
Query: 577 gttgtccttcag 588
||||||||||||
Sbjct: 748 gttgtccttcag 759
>gnl|LJGI|BW620381 homologue to UniRef100_A7PEN5 Cluster: Chromosome chr11
scaffold_13, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr11 scaffold_13, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (39%)
Length = 493
Score = 609 bits (307), Expect = e-173
Identities = 324/332 (97%)
Strand = Plus / Plus
Query: 37 gcggttatggccaatagagacagagatcgagagcttctcatccccgtcgctaacaccgcc 96
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 162 gcggttatggccaatagagacagagatcgagagcttctcatccccgtcgctaacaccgcc 221
Query: 97 gacgccgctgacacctccaaaccgtcctcttcctcctccgccatgcatcatgccggccgc 156
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 222 gacgccgctgacacctccaaaccgtcctcttcctcctccgccatgcgtcatgccggccgc 281
Query: 157 gagactttttacaaagttgttaggagctgggcatcaaaaaagttcatgactggatgtgtc 216
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 gagactttttacaaagttgttaggagctgggcatcaaaaaagttcatgactggatgtgtc 341
Query: 217 attcttttgccaatcgcaatcaccttctacataacatggtggtttattcatttcgtggat 276
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 attcttttgccaatcgcaatcaccttctacataacatggtggtttattcatttcgtggat 401
Query: 277 gggnnnnnnnctccaatctatgctcaacttggaatcaatatctttggtcttggattcata 336
||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 gggtttttttctccaatctatgctcaacttggaatcaatatctttggtcttggattcata 461
Query: 337 acttccataactttcatcttcttggttggggt 368
||||||||||||||||||||||||||||||||
Sbjct: 462 acttccataactttcatcttcttggttggggt 493
>gnl|LJGI|TC70030 homologue to UniRef100_A7PEN5 Cluster: Chromosome chr11
scaffold_13, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr11 scaffold_13, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (28%)
Length = 551
Score = 515 bits (260), Expect = e-145
Identities = 263/264 (99%)
Strand = Plus / Plus
Query: 550 tatgcatttggattcatcacctcatctgttgtccttcagacttattctggagatgaggag 609
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tatgcatttggattcatcacctcatctgttgtccttcagacttattctggagatgaggag 60
Query: 610 ttatgctgtgtttatgttcccacaaaccatctttatattggtgatatatttcttgtcaac 669
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttatgctgtgtttatgttcccaccaaccatctttatattggtgatatatttcttgtcaac 120
Query: 670 gtcaaggatgtcattaggccaaacttatccgtccgagaaggaattgaaattgttgtttcc 729
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcaaggatgtcattaggccaaacttatccgtccgagaaggaattgaaattgttgtttcc 180
Query: 730 ggaggcatgtcaatgccgcagatcctttcaacgcttgattcacgcgttcctgtggaaata 789
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggaggcatgtcaatgccgcagatcctttcaacgcttgattcacgcgttcctgtggaaata 240
Query: 790 aataggcctgacagaagatgaagg 813
||||||||||||||||||||||||
Sbjct: 241 aataggcctgacagaagatgaagg 264
>gnl|LJGI|TC77250 homologue to UniRef100_A7PEN5 Cluster: Chromosome chr11
scaffold_13, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr11 scaffold_13, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (23%)
Length = 770
Score = 432 bits (218), Expect = e-120
Identities = 224/226 (99%)
Strand = Plus / Plus
Query: 588 gacttattctggagatgaggagttatgctgtgtttatgttcccacaaaccatctttatat 647
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 gacttattctggagatgaggagttatgctgtgtttatgttcccacaaaccatctttatat 279
Query: 648 tggtgatatatttcttgtcaacgtcaaggatgtcattaggccaaacttatccgtccgaga 707
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 tggtgatatatttcttgtcaacgtcaaggatgtcattaggccaaacttatccgtccgaga 339
Query: 708 aggaattgaaattgttgtttccggaggcatgtcaatgccgcagatcctttcaacgcttga 767
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 aggaattgaaattgttgtttccggaggcatgtcaatgccgcagatcctttcaacgcttga 399
Query: 768 ttcacgcgttcctgtggaaataaataggcctgacagaagatgaagg 813
|||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 400 ttcacgtgttccagtggaaataaataggcctgacagaagatgaagg 445
>gnl|LJGI|TC78745 homologue to UniRef100_A7PEN5 Cluster: Chromosome chr11
scaffold_13, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr11 scaffold_13, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (5%)
Length = 445
Score = 161 bits (81), Expect = 8e-39
Identities = 81/81 (100%)
Strand = Plus / Plus
Query: 733 ggcatgtcaatgccgcagatcctttcaacgcttgattcacgcgttcctgtggaaataaat 792
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggcatgtcaatgccgcagatcctttcaacgcttgattcacgcgttcctgtggaaataaat 60
Query: 793 aggcctgacagaagatgaagg 813
|||||||||||||||||||||
Sbjct: 61 aggcctgacagaagatgaagg 81
>gnl|LJGI|TC59243 similar to UniRef100_Q8S1P4 Cluster: Membrane protein COV-like;
n=2; Oryza sativa|Rep: Membrane protein COV-like - Oryza
sativa subsp. japonica (Rice), partial (90%)
Length = 1357
Score = 87.7 bits (44), Expect = 1e-16
Identities = 101/120 (84%)
Strand = Plus / Plus
Query: 460 tccaagcaaatcagtgctgctatttcaccagatcaaaattcacaagcctttaaagaagta 519
|||||||| ||||||||||| ||||| |||||||||||| | ||||||||||| |||
Sbjct: 663 tccaagcagatcagtgctgcaatttctccagatcaaaatactactgcctttaaagaggta 722
Query: 520 gccatcattcggcatccacgtgttggtgaatatgcatttggattcatcacctcatctgtt 579
|| || || || ||||| ||||||||||||||||| ||||| ||||| || ||| |||||
Sbjct: 723 gcaattatccgtcatccgcgtgttggtgaatatgcttttggcttcattacatcaactgtt 782
>gnl|LJGI|TC58402 similar to UniRef100_Q8S1P4 Cluster: Membrane protein COV-like;
n=2; Oryza sativa|Rep: Membrane protein COV-like - Oryza
sativa subsp. japonica (Rice), partial (68%)
Length = 805
Score = 71.9 bits (36), Expect = 6e-12
Identities = 100/120 (83%), Gaps = 1/120 (0%)
Strand = Plus / Plus
Query: 460 tccaagcaaatcagtgctgctatttcaccagatcaaaattcacaagcctttaaagaagta 519
|||||||| ||||||||||| ||||| |||||||||||| | ||||||||||| ||
Sbjct: 631 tccaagcagatcagtgctgcaatttctccagatcaaaatactactgcctttaaagaggt- 689
Query: 520 gccatcattcggcatccacgtgttggtgaatatgcatttggattcatcacctcatctgtt 579
|| || || || ||||| ||||||||||||||||| ||||| ||||| || ||| |||||
Sbjct: 690 gcaattatccgtcatccgcgtgttggtgaatatgcttttggcttcattacatcaactgtt 749