Miyakogusa Predicted Gene

Lj4g3v3060360.3
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v3060360.3 tr|I6M418|I6M418_GOSHI Auxin-responsive protein
OS=Gossypium hirsutum GN=Aux3 PE=2 SV=1,58.95,7e-19,AUX_IAA,AUX/IAA
protein; seg,NULL,CUFF.52230.3
         (325 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC70802 similar to UniRef100_A7PEL3 Cluster: Chromosome...   644   0.0  

>gnl|LJGI|TC70802 similar to UniRef100_A7PEL3 Cluster: Chromosome chr11 scaffold_13,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr11 scaffold_13, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (76%)
          Length = 1570

 Score =  644 bits (325), Expect = 0.0
 Identities = 325/325 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggaaagctctgagaatttcacaaagaggagcgctggcttgaacctcaaagccactgag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 atggaaagctctgagaatttcacaaagaggagcgctggcttgaacctcaaagccactgag 222

                                                                       
Query: 61  ctgaggcttggcttgccaggctctgagtcgccggagagggagggaaccaatggtttttca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 ctgaggcttggcttgccaggctctgagtcgccggagagggagggaaccaatggtttttca 282

                                                                       
Query: 121 gctccgcttaagggtttgttgtctggtgctaagaggggtttctctgacgccattgatgga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 gctccgcttaagggtttgttgtctggtgctaagaggggtttctctgacgccattgatgga 342

                                                                       
Query: 181 ggttctgggaactgggttctctctggaaacggtggatctgaaatgggttctggtaaagat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 ggttctgggaactgggttctctctggaaacggtggatctgaaatgggttctggtaaagat 402

                                                                       
Query: 241 ggtgtcttgttctctcctcggggtggtgctgccggtaattctctcgctctctctgctgcg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 ggtgtcttgttctctcctcggggtggtgctgccggtaattctctcgctctctctgctgcg 462

                                    
Query: 301 cctaactgcaacaatcaactaacga 325
           |||||||||||||||||||||||||
Sbjct: 463 cctaactgcaacaatcaactaacga 487