Miyakogusa Predicted Gene
- Lj4g3v3060320.3
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v3060320.3 tr|G7L858|G7L858_MEDTR Xyloglucan
endotransglycosylase OS=Medicago truncatula GN=MTR_8g102910 PE=4
S,85.64,0,Concanavalin A-like lectins/glucanases,Concanavalin A-like
lectin/glucanases superfamily; GLHYDRLASE,CUFF.52203.3
(621 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC66731 similar to UniRef100_A7PEK6 Cluster: Chromosome... 389 e-107
gnl|LJGI|TC70245 UniRef100_Q68A08 Cluster: Xyloglucan endotransg... 375 e-103
gnl|LJGI|TC71739 similar to UniRef100_A7Q6H8 Cluster: Chromosome... 64 1e-09
gnl|LJGI|TC81330 similar to UniRef100_Q2HRU5 Cluster: Glycoside ... 62 4e-09
gnl|LJGI|TC62499 similar to UniRef100_A7Q6H5 Cluster: Chromosome... 54 1e-06
gnl|LJGI|TC60380 similar to UniRef100_A7Q6H5 Cluster: Chromosome... 54 1e-06
gnl|LJGI|TC58683 homologue to UniRef100_Q2HRU6 Cluster: Glycosid... 54 1e-06
>gnl|LJGI|TC66731 similar to UniRef100_A7PEK6 Cluster: Chromosome chr11 scaffold_13,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_13, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (66%)
Length = 907
Score = 389 bits (196), Expect = e-107
Identities = 196/196 (100%)
Strand = Plus / Plus
Query: 268 ttatcctcaacaggaagccagcatgatgagatagattttgagttcttaggcaacactaca 327
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 ttatcctcaacaggaagccagcatgatgagatagattttgagttcttaggcaacactaca 377
Query: 328 ggacaaccatacatagtaaataccaacatatacacccgaggaaaaggaagccgagagcaa 387
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 ggacaaccatacatagtaaataccaacatatacacccgaggaaaaggaagccgagagcaa 437
Query: 388 cgattcttcctctggtttgacccaactgctgatttccacaattacaccattcactggaat 447
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 cgattcttcctctggtttgacccaactgctgatttccacaattacaccattcactggaat 497
Query: 448 cccacagaaattgtgt 463
||||||||||||||||
Sbjct: 498 cccacagaaattgtgt 513
Score = 317 bits (160), Expect = 5e-86
Identities = 160/160 (100%)
Strand = Plus / Plus
Query: 462 gtggtttgttgatagtctgccaatccgggttttccggaactacgaaaatgaaggcattgc 521
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 gtggtttgttgatagtctgccaatccgggttttccggaactacgaaaatgaaggcattgc 671
Query: 522 ctatccaaacaagcaaggaatgagggttcataccagcctatggaatgcagacaactgggc 581
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 ctatccaaacaagcaaggaatgagggttcataccagcctatggaatgcagacaactgggc 731
Query: 582 caccagaggcgggcatgtcaagaccaactggaaaggtgcg 621
||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 caccagaggcgggcatgtcaagaccaactggaaaggtgcg 771
Score = 208 bits (105), Expect = 3e-53
Identities = 105/105 (100%)
Strand = Plus / Plus
Query: 163 tcaggatcagcagctcaatcgaagagatccttcttatttgggagtactgaaatgctgatc 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56 tcaggatcagcagctcaatcgaagagatccttcttatttgggagtactgaaatgctgatc 115
Query: 223 aagctgatacctggtaattccgcaggaacagttacagccttctat 267
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116 aagctgatacctggtaattccgcaggaacagttacagccttctat 160
>gnl|LJGI|TC70245 UniRef100_Q68A08 Cluster: Xyloglucan endotransglycosylase; n=1;
Lotus japonicus|Rep: Xyloglucan endotransglycosylase -
Lotus japonicus, complete
Length = 505
Score = 375 bits (189), Expect = e-103
Identities = 420/497 (84%)
Strand = Plus / Plus
Query: 88 agcatgtacctcacttggggtgctcaacatgcatcaatccttggtgaagaccttcatctt 147
||||||||| |||| |||||||||||||| ||| ||| | ||||| || || || |||
Sbjct: 6 agcatgtacatcacctggggtgctcaacacgcaataatgcagggtgacgatctccagctt 65
Query: 148 gtgttggatcgaacatcaggatcagcagctcaatcgaagagatccttcttatttgggagt 207
|||||||||| ||| |||||||| ||||||||| | |||| | | ||||||||||| |
Sbjct: 66 gtgttggatcaaacctcaggatccgcagctcaaacaaagaaagcattcttatttggaacc 125
Query: 208 actgaaatgctgatcaagctgatacctggtaattccgcaggaacagttacagccttctat 267
| ||||| | |||||| || | ||||| || || ||||||| |||||||||| |||
Sbjct: 126 attgaaaaccgaatcaagttggtgcctggcaactctgcaggaattgttacagcctattat 185
Query: 268 ttatcctcaacaggaagccagcatgatgagatagattttgagttcttaggcaacactaca 327
|||| || |||||||||||||||||||||||||||||||||||||||||||||| | ||
Sbjct: 186 ctatcatctacaggaagccagcatgatgagatagattttgagttcttaggcaacatttca 245
Query: 328 ggacaaccatacatagtaaataccaacatatacacccgaggaaaaggaagccgagagcaa 387
|||||||||||||| || | || ||||| ||||| | |||||| |||||| | ||||||
Sbjct: 246 ggacaaccatacattgtccacacaaacatttacacacaaggaaatggaagcagggagcaa 305
Query: 388 cgattcttcctctggtttgacccaactgctgatttccacaattacaccattcactggaat 447
| ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 caattttacctctggtttgacccaactgctgatttccacaattacaccattcactggaat 365
Query: 448 cccacagaaattgtgtggtttgttgatagtctgccaatccgggttttccggaactacgaa 507
||||| ||| ||||||||| ||||||||| | |||||| |||| ||||| |||||||||
Sbjct: 366 cccactgaagttgtgtggtatgttgatagcattccaatcagggtgttccgcaactacgaa 425
Query: 508 aatgaaggcattgcctatccaaacaagcaaggaatgagggttcataccagcctatggaat 567
||||| || ||||| || |||||||||||||||||||||||| |||| || ||||||||
Sbjct: 426 aatgagggaattgcttacccaaacaagcaaggaatgagggtttatacgagtctatggaac 485
Query: 568 gcagacaactgggccac 584
|| || ||||||||||
Sbjct: 486 gcggatgactgggccac 502
>gnl|LJGI|TC71739 similar to UniRef100_A7Q6H8 Cluster: Chromosome chr11 scaffold_56,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_56, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (95%)
Length = 1096
Score = 63.9 bits (32), Expect = 1e-09
Identities = 59/68 (86%)
Strand = Plus / Plus
Query: 382 gagcaacgattcttcctctggtttgacccaactgctgatttccacaattacaccattcac 441
||||||| ||||| |||||||| ||||||||||| |||||||||| ||| |||||| |
Sbjct: 490 gagcaacaattctatctctggttcgacccaactgcagatttccacacttattccattctc 549
Query: 442 tggaatcc 449
||||||||
Sbjct: 550 tggaatcc 557
>gnl|LJGI|TC81330 similar to UniRef100_Q2HRU5 Cluster: Glycoside hydrolase, family
16; Xyloglucan endo-transglycosylase, C- terminal; n=1;
Medicago truncatula|Rep: Glycoside hydrolase, family 16;
Xyloglucan endo-transglycosylase, C- terminal - Medicago
truncatula (Barrel medic), complete
Length = 936
Score = 61.9 bits (31), Expect = 4e-09
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 287 agcatgatgagatagattttgagttcttaggcaacactacaggacaaccatacat 341
|||||||||||||||| |||||||||||||| |||| |||||||| || |||||
Sbjct: 302 agcatgatgagatagactttgagttcttaggtaacagaacaggacagccttacat 356
>gnl|LJGI|TC62499 similar to UniRef100_A7Q6H5 Cluster: Chromosome chr11 scaffold_56,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_56, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (89%)
Length = 1133
Score = 54.0 bits (27), Expect = 1e-06
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 397 ctctggtttgacccaactgctgatttccaca 427
|||||||||||||||||||| ||||||||||
Sbjct: 501 ctctggtttgacccaactgcagatttccaca 531
>gnl|LJGI|TC60380 similar to UniRef100_A7Q6H5 Cluster: Chromosome chr11 scaffold_56,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_56, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (89%)
Length = 1106
Score = 54.0 bits (27), Expect = 1e-06
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 397 ctctggtttgacccaactgctgatttccaca 427
|||||||||||||||||||| ||||||||||
Sbjct: 469 ctctggtttgacccaactgcagatttccaca 499
>gnl|LJGI|TC58683 homologue to UniRef100_Q2HRU6 Cluster: Glycoside hydrolase, family
16; Xyloglucan endo-transglycosylase, C- terminal; n=1;
Medicago truncatula|Rep: Glycoside hydrolase, family 16;
Xyloglucan endo-transglycosylase, C- terminal - Medicago
truncatula (Barrel medic), complete
Length = 1166
Score = 54.0 bits (27), Expect = 1e-06
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 287 agcatgatgagatagattttgagttcttaggcaacactacaggacaaccatacat 341
|||| ||||||||||| |||||||||||||| |||| |||||||||| |||||
Sbjct: 326 agcacgatgagatagactttgagttcttagggaacagatcaggacaaccttacat 380