Miyakogusa Predicted Gene
- Lj4g3v3031680.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v3031680.2 Non Chatacterized Hit- tr|I1KJS6|I1KJS6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.53779 PE,76.57,0,NAM,No
apical meristem (NAM) protein; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; NAC,No apical,CUFF.52161.2
(1338 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO033890 homologue to UniRef100_A7PEE6 Cluster: Chromos... 1332 0.0
gnl|LJGI|GO040430 homologue to UniRef100_A7PEE6 Cluster: Chromos... 565 e-160
gnl|LJGI|GO029863 similar to UniRef100_A7PJ97 Cluster: Chromosom... 62 9e-09
>gnl|LJGI|GO033890 homologue to UniRef100_A7PEE6 Cluster: Chromosome chr11
scaffold_13, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr11 scaffold_13, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (35%)
Length = 816
Score = 1332 bits (672), Expect = 0.0
Identities = 774/807 (95%), Gaps = 9/807 (1%)
Strand = Plus / Plus
Query: 181 atggaacatcttgaagccaagggaaaggatatgaaatcacaccctttgattgatgagttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 atggaacatcttgaagccaagggaaaggatatgaaatcacaccctttgattgatgagttc 62
Query: 241 attctcactattgaaggagaagatgggatttgttacacccatcctgaaaaaattccagga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 attctcactattgaaggagaagatgggatttgttacacccatcctgaaaaaattccagga 122
Query: 301 gtatcaagagatgggttgagtagacacttcttccacagaccatcaaaggcatacacaaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 gtatcaagagatgggttgagtagacacttcttccacagaccatcaaaggcatacacaaca 182
Query: 361 ggtacaagaaaaaggagaaagattcaaactgaatgtgatcacttgcaacaaggaggagaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 ggtacaagaaaaaggagaaagattcaaactgaatgtgatcacttgcaacaaggaggagaa 242
Query: 421 acccgttggcacaaaactgggaaaacaagaccagtgattgtgaatggaaaacaaaaaggg 480
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 243 acccgttggcacaaaactgggaaaacaggaccagtgattgtgaatggaaaacaaaaaggg 302
Query: 481 tgcaagaaaattctagtcctgtataccaattttgggaagaacagaaaaccagaaaagaca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 tgcaagaaaattctagtcctgtataccaattttgggaagaacagaaaaccagaaaagaca 362
Query: 541 aactgggtgatgcaccagtaccatctgggacagaatgaagaagagaaagaaggggaactt 600
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 363 aactgggtgatgcaccagtaccatctgggacagaatgaagaagagaaagaaggggagctt 422
Query: 601 gtggtgtcaaagatattttatcagacacagccaaggcagtgtaattggtctgagaaaagt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 gtggtgtcaaagatattttatcagacacagccaaggcagtgtaattggtctgagaaaagt 482
Query: 661 gcagnnnnnnnnnnnnnnnnnnnnnatggtgaaggaagtggagaccctaactacagtgga 720
|||| |||||||||||||||||||||||||||||||||||
Sbjct: 483 gcag---caacaacaacaacaacaaatggtgaaggaagtggagaccctaactacagtgga 539
Query: 721 agtggtagttgctcttctaaggaagtggttactcaaagagatgagatgtctgctgctgtt 780
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 agtggtagtcgctcttctaaggaagtggttactcaaagagatgagatgtctgctgctgtt 599
Query: 781 gttggggttactccaatgacaagcttcaccactgctttggatattcagcacctaaaatct 840
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 600 gttggggttactccaatgacaagcttcaccactgctttggatattcagcgcctaaaatct 659
Query: 841 gaccatttaagcttcttcccattcagaaaaagcttgcatgaggttggaataggagaagct 900
|||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||||
Sbjct: 660 gaccatttaagcttcttcccattcag-aaaagcttgcatga-gttggaata-gagaagct 716
Query: 901 tcgaggacatcaagagaagttcaagcatcaggctcatgcgaggaagaagtacatgaacaa 960
|||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||
Sbjct: 717 tcgaggacatcaagagaagttcaagcatca-gctcatgcgggga--gagtacatgaacaa 773
Query: 961 cggcatgtagcacatcatgatcatcat 987
|||||||||||||||||||||||||||
Sbjct: 774 cggcatgtagcacatcatgatcatcat 800
>gnl|LJGI|GO040430 homologue to UniRef100_A7PEE6 Cluster: Chromosome chr11 scaffold_13,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_13, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (7%)
Length = 584
Score = 565 bits (285), Expect = e-160
Identities = 285/285 (100%)
Strand = Plus / Minus
Query: 1054 atctccacaatcatctctccaccacctctcaaccacacatccatcaatatcctagacgac 1113
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 atctccacaatcatctctccaccacctctcaaccacacatccatcaatatcctagacgac 525
Query: 1114 aattcttaccaagtctccacaacaacaatgatgctccaaaatgataattttcagcaacat 1173
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 aattcttaccaagtctccacaacaacaatgatgctccaaaatgataattttcagcaacat 465
Query: 1174 gatgataaactaggaggaaggtctgcgtctggtttggaggaactcattatggggtgcact 1233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 gatgataaactaggaggaaggtctgcgtctggtttggaggaactcattatggggtgcact 405
Query: 1234 tcaactcttaccaaacagtcacaggagtcatccatggcaaacccacaagaagctgagtgg 1293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 tcaactcttaccaaacagtcacaggagtcatccatggcaaacccacaagaagctgagtgg 345
Query: 1294 ttgaagtactcttcttactggccacaccctgaccatcattgatgc 1338
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 ttgaagtactcttcttactggccacaccctgaccatcattgatgc 300
>gnl|LJGI|GO029863 similar to UniRef100_A7PJ97 Cluster: Chromosome chr12 scaffold_18,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_18, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (62%)
Length = 832
Score = 61.9 bits (31), Expect = 9e-09
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 538 acaaactgggtgatgcaccagtaccatctgggacagaatgaagaagagaaagaagggga 596
||||||||||| |||||||||||||| || || | |||||||||||||| ||||||||
Sbjct: 346 acaaactgggtcatgcaccagtaccaccttggcaacaatgaagaagagaaggaagggga 288