Miyakogusa Predicted Gene
- Lj4g3v3015280.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v3015280.1 Non Chatacterized Hit- tr|I3SY91|I3SY91_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,98.51,0,Tetraspannin,Tetraspanin/Peripherin; SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL; seg,NULL; TMFO,CUFF.52126.1
(810 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC67749 similar to UniRef100_A7PE96 Cluster: Chromosome... 525 e-148
gnl|LJGI|TC73468 similar to UniRef100_A7PE96 Cluster: Chromosome... 432 e-120
gnl|LJGI|TC76721 similar to UniRef100_A7PFH9 Cluster: Chromosome... 52 5e-06
gnl|LJGI|TC72506 similar to UniRef100_A7PFH9 Cluster: Chromosome... 52 5e-06
>gnl|LJGI|TC67749 similar to UniRef100_A7PE96 Cluster: Chromosome chr11 scaffold_13,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_13, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (33%)
Length = 675
Score = 525 bits (265), Expect = e-148
Identities = 271/273 (99%)
Strand = Plus / Plus
Query: 538 tttgtgagccccatattgtggacaaaccctgtgaatcccatggctgatccagattgcaac 597
|||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||
Sbjct: 1 tttgtgagccccatattgtggacagaacctgtgaatcccatggctgatccagattgcaac 60
Query: 598 ttgtggaacaatgaccagaaccagctatgctacaattgcaatgcttgcaaggctggttta 657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttgtggaacaatgaccagaaccagctatgctacaattgcaatgcttgcaaggctggttta 120
Query: 658 ctggggaacctcagaaaagaatggaggaaagcaaatatcattctgattgtggctgtggtg 717
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ctggggaacctcagaaaagaatggaggaaagcaaatatcattctgattgtggctgtggtg 180
Query: 718 gtccttatatgtgtctatatcattgcttgcagtgccttcaagaatgcccagacagaagac 777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gtccttatatgtgtctatatcattgcttgcagtgccttcaagaatgcccagacagaagac 240
Query: 778 ctcttcgaccgttacaaacagggttgggtttga 810
|||||||||||||||||||||||||||||||||
Sbjct: 241 ctcttcgaccgttacaaacagggttgggtttga 273
>gnl|LJGI|TC73468 similar to UniRef100_A7PE96 Cluster: Chromosome chr11 scaffold_13,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_13, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (61%)
Length = 729
Score = 432 bits (218), Expect = e-120
Identities = 218/218 (100%)
Strand = Plus / Plus
Query: 272 tcgccttcgttgttaccagacctgatgggagctacgatgttcccggaagagggtacaagg 331
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 tcgccttcgttgttaccagacctgatgggagctacgatgttcccggaagagggtacaagg 571
Query: 332 agtacacgcttgatcgattctcctcgtggttgagaaaccatgttacggggtctggaagct 391
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 agtacacgcttgatcgattctcctcgtggttgagaaaccatgttacggggtctggaagct 631
Query: 392 ggcggaagattagaccctgtttggctgcttctgatgtctgcattaatcttgctcgcaatt 451
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 ggcggaagattagaccctgtttggctgcttctgatgtctgcattaatcttgctcgcaatt 691
Query: 452 acatcactcctgatcaattcttcaattctcacctctct 489
||||||||||||||||||||||||||||||||||||||
Sbjct: 692 acatcactcctgatcaattcttcaattctcacctctct 729
Score = 408 bits (206), Expect = e-113
Identities = 206/206 (100%)
Strand = Plus / Plus
Query: 1 atgggggtaagcaacaacatcaccgcagtgctcaacttcatagccatgctttcctcaatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atgggggtaagcaacaacatcaccgcagtgctcaacttcatagccatgctttcctcaatt 300
Query: 61 cccatcatagcctccggcatttggctcgcatccaacccagacaaccagtgcatcaccaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cccatcatagcctccggcatttggctcgcatccaacccagacaaccagtgcatcaccaac 360
Query: 121 ttccgctggcccatcgtcatcatcggcctcctcatcctcctcgtctccctcgccggcttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ttccgctggcccatcgtcatcatcggcctcctcatcctcctcgtctccctcgccggcttc 420
Query: 181 gtcggcgcttactggaacaaacaggg 206
||||||||||||||||||||||||||
Sbjct: 421 gtcggcgcttactggaacaaacaggg 446
>gnl|LJGI|TC76721 similar to UniRef100_A7PFH9 Cluster: Chromosome chr11 scaffold_14,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_14, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (87%)
Length = 1216
Score = 52.0 bits (26), Expect = 5e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 155 tcctcctcgtctccctcgccggcttcgtcggcgc 188
|||||||||||||||||||||| ||||||||||
Sbjct: 215 tcctcctcgtctccctcgccggtctcgtcggcgc 248
>gnl|LJGI|TC72506 similar to UniRef100_A7PFH9 Cluster: Chromosome chr11 scaffold_14,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_14, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (49%)
Length = 489
Score = 52.0 bits (26), Expect = 5e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 155 tcctcctcgtctccctcgccggcttcgtcggcgc 188
|||||||||||||||||||||| ||||||||||
Sbjct: 249 tcctcctcgtctccctcgccggtctcgtcggcgc 282