Miyakogusa Predicted Gene
- Lj4g3v3015090.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v3015090.1 Non Chatacterized Hit- tr|K3ZJD6|K3ZJD6_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si026411,33.12,9e-17,Nucleotidylyl transferase,NULL;
CTP_transf_2,Cytidylyltransferase; cyt_tran_rel:
cytidyltransferase-,CUFF.52108.1
(1260 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC72826 similar to UniRef100_A7QV41 Cluster: Chromosome... 1261 0.0
gnl|LJGI|FS354782 similar to UniRef100_A7QV41 Cluster: Chromosom... 811 0.0
gnl|LJGI|TC61190 homologue to UniRef100_A2Q3V6 Cluster: Cytidyly... 90 4e-17
gnl|LJGI|TC65347 similar to UniRef100_A7Q9T3 Cluster: Chromosome... 60 4e-08
>gnl|LJGI|TC72826 similar to UniRef100_A7QV41 Cluster: Chromosome undetermined
scaffold_184, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_184,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (46%)
Length = 782
Score = 1261 bits (636), Expect = 0.0
Identities = 636/636 (100%)
Strand = Plus / Plus
Query: 1 atggattatgaaagtaacagttggatatgggagggggtgtactactatccacatttgttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 atggattatgaaagtaacagttggatatgggagggggtgtactactatccacatttgttt 206
Query: 61 ggtggtctaatggttacagcagccttgctgggcttgtcaaccagctattttggagggatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 ggtggtctaatggttacagcagccttgctgggcttgtcaaccagctattttggagggatt 266
Query: 121 ggtcatttgccacttccatttccctggtctaattcggggatttttcacaagaagaaatca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 ggtcatttgccacttccatttccctggtctaattcggggatttttcacaagaagaaatca 326
Query: 181 gggaagaggcgcgttcgggtttacatggatggctgttttgatctgatgcattatggccat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 gggaagaggcgcgttcgggtttacatggatggctgttttgatctgatgcattatggccat 386
Query: 241 gccaatgctctcagacaagcaaaagctctaggagatgaattggttgtgggtcttgtcaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 gccaatgctctcagacaagcaaaagctctaggagatgaattggttgtgggtcttgtcaat 446
Query: 301 gatgaggagatccttgccactaaagggcctcctgttttaaccatggcggagaggctagcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 gatgaggagatccttgccactaaagggcctcctgttttaaccatggcggagaggctagcc 506
Query: 361 cttgtgagtggattgaagtgggtggatgaggtcataactgatgctccttatgcaattact 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 cttgtgagtggattgaagtgggtggatgaggtcataactgatgctccttatgcaattact 566
Query: 421 gagcaattcttgcatcgtctctttcatgaatacaaaattgactacgtcatacatggcgat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 gagcaattcttgcatcgtctctttcatgaatacaaaattgactacgtcatacatggcgat 626
Query: 481 gatccttgcttgcttccagatggaacagatgcttatgctgcagcaaagaaagctggtcgt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 gatccttgcttgcttccagatggaacagatgcttatgctgcagcaaagaaagctggtcgt 686
Query: 541 tacaagcaaatcaaacgtactgaaggagtttccagcacagacatcgtaggaagaataatg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 tacaagcaaatcaaacgtactgaaggagtttccagcacagacatcgtaggaagaataatg 746
Query: 601 tcttctttaaaagatcaaaaaacttgtgaagatcaa 636
||||||||||||||||||||||||||||||||||||
Sbjct: 747 tcttctttaaaagatcaaaaaacttgtgaagatcaa 782
>gnl|LJGI|FS354782 similar to UniRef100_A7QV41 Cluster: Chromosome undetermined
scaffold_184, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_184, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(29%)
Length = 654
Score = 811 bits (409), Expect = 0.0
Identities = 409/409 (100%)
Strand = Plus / Minus
Query: 852 agttggcatacactcggatgaaacagtgagcgaacatcgaggaaatcactatccaattat 911
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 agttggcatacactcggatgaaacagtgagcgaacatcgaggaaatcactatccaattat 595
Query: 912 gcatctacatgagcggagtcttagtgtgctagcttgccgtcatgttgatgaagtcattat 971
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 gcatctacatgagcggagtcttagtgtgctagcttgccgtcatgttgatgaagtcattat 535
Query: 972 tggtgcaccttgggaaattacaaaggacatgatcacaactttcaatatctcactagttgt 1031
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 tggtgcaccttgggaaattacaaaggacatgatcacaactttcaatatctcactagttgt 475
Query: 1032 gcatggaactgttgctgagaagtcattacatagtgaaagagatccatatgaagttccaaa 1091
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 gcatggaactgttgctgagaagtcattacatagtgaaagagatccatatgaagttccaaa 415
Query: 1092 gagcatgggaatgttccgcttgcttgaaagtccaaaagatatcactaccactacggtggc 1151
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 gagcatgggaatgttccgcttgcttgaaagtccaaaagatatcactaccactacggtggc 355
Query: 1152 ccaaaggatattggctaatcatgaagcttacgagaagcgcaatgcgaaaaaatctcagag 1211
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 ccaaaggatattggctaatcatgaagcttacgagaagcgcaatgcgaaaaaatctcagag 295
Query: 1212 tgaaaagagatactatgaagagaaaaattatgtgtctggagactaggca 1260
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 tgaaaagagatactatgaagagaaaaattatgtgtctggagactaggca 246
>gnl|LJGI|TC61190 homologue to UniRef100_A2Q3V6 Cluster: Cytidylyltransferase; n=1;
Medicago truncatula|Rep: Cytidylyltransferase - Medicago
truncatula (Barrel medic), partial (69%)
Length = 724
Score = 89.7 bits (45), Expect = 4e-17
Identities = 111/133 (83%)
Strand = Plus / Plus
Query: 446 atgaatacaaaattgactacgtcatacatggcgatgatccttgcttgcttccagatggaa 505
|||| ||||| ||||||||| |||| ||||| ||||||||||| | ||||| |||||||
Sbjct: 487 atgagtacaatattgactacatcattcatggagatgatccttgtgttcttccggatggaa 546
Query: 506 cagatgcttatgctgcagcaaagaaagctggtcgttacaagcaaatcaaacgtactgaag 565
| |||||||||||| || || || ||||| ||||||||||| || || || || ||||
Sbjct: 547 ctgatgcttatgctcacgccaaaaaggctggccgttacaagcagataaagcgcaccgaag 606
Query: 566 gagtttccagcac 578
|||||||||||||
Sbjct: 607 gagtttccagcac 619
Score = 54.0 bits (27), Expect = 2e-06
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 202 tacatggatggctgttttgatctgatgcattatggccat 240
||||||||||| || |||||| |||||||||||||||||
Sbjct: 243 tacatggatggttgctttgatatgatgcattatggccat 281
>gnl|LJGI|TC65347 similar to UniRef100_A7Q9T3 Cluster: Chromosome chr8 scaffold_68,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_68, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (41%)
Length = 1084
Score = 60.0 bits (30), Expect = 4e-08
Identities = 108/134 (80%)
Strand = Plus / Plus
Query: 907 attatgcatctacatgagcggagtcttagtgtgctagcttgccgtcatgttgatgaagtc 966
||||||||||| ||||| | ||||| ||||| |||| ||||| |||| ||||| ||
Sbjct: 162 attatgcatcttcatgaaagaagtctaagtgtcttagcatgccgatatgtggatgaggtt 221
Query: 967 attattggtgcaccttgggaaattacaaaggacatgatcacaactttcaatatctcacta 1026
|| ||||||||||| ||||| | | ||||| ||||||||||| || || |||||| ||
Sbjct: 222 ataattggtgcaccatgggaggtgtctaaggatatgatcacaacctttaacatctcatta 281
Query: 1027 gttgtgcatggaac 1040
||||| ||||||||
Sbjct: 282 gttgttcatggaac 295