Miyakogusa Predicted Gene

Lj4g3v3014900.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v3014900.1 Non Chatacterized Hit- tr|E1ZK35|E1ZK35_CHLVA
Putative uncharacterized protein OS=Chlorella
variabil,34.05,1e-17,PseudoU_synth_1,Pseudouridine synthase I, TruA,
alpha/beta domain; no description,Pseudouridine synt,CUFF.52095.1
         (1170 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS332620 similar to UniRef100_A7PC02 Cluster: Chromosom...  1253   0.0  

>gnl|LJGI|FS332620 similar to UniRef100_A7PC02 Cluster: Chromosome chr2 scaffold_11,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr2 scaffold_11, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (39%)
          Length = 633

 Score = 1253 bits (632), Expect = 0.0
 Identities = 632/632 (100%)
 Strand = Plus / Plus

                                                                       
Query: 128 atgcgcattacaaccacaccgatccctgtaaacacgcacgatggaacgctagggagagct 187
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2   atgcgcattacaaccacaccgatccctgtaaacacgcacgatggaacgctagggagagct 61

                                                                       
Query: 188 acgagtttatgtatgcaaggccttggcaacgagtcaatgatttttacttgaatgctgttc 247
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62  acgagtttatgtatgcaaggccttggcaacgagtcaatgatttttacttgaatgctgttc 121

                                                                       
Query: 248 ttggcaacttgtctttgcctcttctttttggagctgagaaaattcatgatcataataatg 307
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 ttggcaacttgtctttgcctcttctttttggagctgagaaaattcatgatcataataatg 181

                                                                       
Query: 308 agcctggaattccagcagtttctgataaacctgagtttgaaagtgttgcgtcgcgaggtc 367
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 agcctggaattccagcagtttctgataaacctgagtttgaaagtgttgcgtcgcgaggtc 241

                                                                       
Query: 368 gcggtgggaggtgggcaaggctgacattcaaaattgttctttcataccacggaggttctt 427
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 gcggtgggaggtgggcaaggctgacattcaaaattgttctttcataccacggaggttctt 301

                                                                       
Query: 428 ttgacggatggcaaaagcagccaggcttgaacactgtccaaagtgtaatagaagggccgc 487
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 ttgacggatggcaaaagcagccaggcttgaacactgtccaaagtgtaatagaagggccgc 361

                                                                       
Query: 488 ttggtacatttgttgatgaaaataaaactcaacagctcaaggacagaggtttgccaattg 547
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 ttggtacatttgttgatgaaaataaaactcaacagctcaaggacagaggtttgccaattg 421

                                                                       
Query: 548 aaggttccgttactgttgctggtcgtacagacaaaggagtgacagcccttcaacaagttt 607
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 aaggttccgttactgttgctggtcgtacagacaaaggagtgacagcccttcaacaagttt 481

                                                                       
Query: 608 gttctttctacacttggaagaaggatgttaaaccaagagatattgaagatgcaatctatc 667
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 gttctttctacacttggaagaaggatgttaaaccaagagatattgaagatgcaatctatc 541

                                                                       
Query: 668 atgcagcaccaggaaagctaagggtcatatcagtttctgaggtatcacgtgcctttcatc 727
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 atgcagcaccaggaaagctaagggtcatatcagtttctgaggtatcacgtgcctttcatc 601

                                           
Query: 728 ccaatttctctgccaaatggaggcgttacctt 759
           ||||||||||||||||||||||||||||||||
Sbjct: 602 ccaatttctctgccaaatggaggcgttacctt 633